RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 RPL30P62888 115 aaKnown RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 PSG9Q00887 426 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 PVRIGQ6DKI7 326 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 TMEM167AQ8TBQ9 72 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 GUCD1Q96NT3 240 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 SCRT1Q9BWW7 348 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 CLCF1Q9UBD9 225 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 SPCS1Q9Y6A9 102 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 ZNF716A6NP11 495 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 PEX7O00628 323 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 TMEM11P17152 192 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 PRSS12P56730 875 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 PRR18Q8N4B5 295 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 OR1K1Q8NGR3 316 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 OR9G1Q8NH87 305 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 WNT2BQ93097 391 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 GNB4Q9HAV0 340 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 OTORQ9NRC9 128 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 CALYQ9NYX4 217 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 PRR13Q9NZ81 148 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 POLR3KQ9Y2Y1 108 aaPredicted RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 RGPD2P0DJD1 1756 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 TRAV34A0A0B4J273 112 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 C15orf61A6NNL5 157 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 KLF7O75840 302 aaPredicted RBP3.41□□□□□ -1.86
SOX6-217ENST00000533870 HBDP02042 147 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 PAX2Q02962 417 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 TIMM23BQ5SRD1 257 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 ZADH2Q8N4Q0 377 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 DEFB125Q8N687 156 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 HIGD1AQ9Y241 93 aa3.41□□□□□ -1.86
SOX6-217ENST00000533870 A0A0A6YYD4 124 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 IGKV1-12A0A0C4DH73 117 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 IGKV1D-12P01611 117 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 SP9P0CG40 484 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 CA6P23280 308 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 LGALS4P56470 323 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 RBPJQ06330 500 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 ZNF816Q0VGE8 651 aaPredicted RBP3.4□□□□□ -1.86
SOX6-217ENST00000533870 KLF5Q13887 457 aaPredicted RBP3.4□□□□□ -1.86
SOX6-217ENST00000533870 BLNKQ8WV28 456 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 SNRNP40Q96DI7 357 aaKnown RBP3.4□□□□□ -1.86
SOX6-217ENST00000533870 MS4A5Q9H3V2 200 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 DYNLRB1Q9NP97 96 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 CAMPP49913 170 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 RPS16P62249 146 aaKnown RBP3.4□□□□□ -1.86
SOX6-217ENST00000533870 SRSF1Q07955 248 aaKnown RBP eCLIP3.4□□□□□ -1.86
SOX6-217ENST00000533870 FAM214BQ7L5A3 538 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 NUDT11Q96G61 164 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 GGTLC1Q9BX51 225 aa3.4□□□□□ -1.86
SOX6-217ENST00000533870 WIPF3A6NGB9 483 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 FTH1P19P0C7X4 201 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 OCIAD2Q56VL3 154 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 RPRMLQ8N4K4 120 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 ZNF414Q96IQ9 312 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 YPEL4Q96NS1 127 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.4□□□□□ -1.87
SOX6-217ENST00000533870 OOSP1A8MZH6 123 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 UPK2O00526 184 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 SMIM13P0DJ93 91 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 GNB1P62873 340 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 SRSF6Q13247 344 aaKnown RBP3.4□□□□□ -1.87
SOX6-217ENST00000533870 CLEC12BQ2HXU8 276 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 OR5AN1Q8NGI8 311 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 TRGV5A0A0B4J1U4 118 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 IGKV1D-43A0A0B4J1Z2 117 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 IGKV1D-13A0A0B4J2D9 117 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 NCBP2LA6PVI3 153 aaKnown RBP3.4□□□□□ -1.87
SOX6-217ENST00000533870 MLNRO43193 412 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 LMX1BO60663 402 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 CLPSP04118 112 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 PRSS1P07477 247 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 IGKV1-13P0DP09 117 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 PRDX2P32119 198 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 ID4P47928 161 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 ERVK11-1P61568 191 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 PDE6HQ13956 83 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 TMEM136Q6ZRR5 245 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 ZIC4Q8N9L1 334 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 OCC1Q8TAD7 63 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 JKAMPQ9P055 326 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 LOXL2Q9Y4K0 774 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 NRXN2Q9P2S2 1712 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 CREBBPQ92793 2442 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 SRRM5B3KS81 715 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 PSG3Q16557 428 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 TPTE2P1Q5T6R2 138 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 ZNF497Q6ZNH5 498 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 ORMDL3Q8N138 153 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 LYG1Q8N1E2 194 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 TMEM116Q8NCL8 245 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 MAP1LC3AQ9H492 121 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 ZNF319Q9P2F9 582 aa3.4□□□□□ -1.87
SOX6-217ENST00000533870 FOXA2Q9Y261 457 aaPredicted RBP3.4□□□□□ -1.87
SOX6-217ENST00000533870 TRBV6-1A0A0K0K1D8 114 aa3.39□□□□□ -1.87
SOX6-217ENST00000533870 CDX4O14627 284 aaPredicted RBP3.39□□□□□ -1.87
SOX6-217ENST00000533870 GFRA3O60609 400 aa3.39□□□□□ -1.87
SOX6-217ENST00000533870 ARL14EPLP0DKL9 152 aa3.39□□□□□ -1.87
SOX6-217ENST00000533870 CCL3P10147 92 aa3.39□□□□□ -1.87
SOX6-217ENST00000533870 DUTP33316 252 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms