RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 HRASLSQ9HDD0 168 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 AKIP1Q9NQ31 210 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 EHFQ9NZC4 300 aa8□□□□□ -1.13
CAPN1-225ENST00000533704 TRIM64CA6NLI5 447 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 TMEM127O75204 238 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 PMP2P02689 132 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 MYOD1P15172 320 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 RPA2P15927 270 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 BRWD1-AS2P59051 145 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 NCS1P62166 190 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 ZNF45Q02386 682 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 KLF5Q13887 457 aaPredicted RBP7.99□□□□□ -1.13
CAPN1-225ENST00000533704 TATDN3Q17R31 274 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 AADACL3Q5VUY0 350 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 ZNF343Q6P1L6 599 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 SLC25A42Q86VD7 318 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 OR5AP2Q8NGF4 316 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 OR9G4Q8NGQ1 327 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 OR5H2Q8NGV7 314 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 TMEM167AQ8TBQ9 72 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 COMMD3Q9UBI1 195 aa7.99□□□□□ -1.13
CAPN1-225ENST00000533704 STAB2Q8WWQ8 2551 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 FAM223BA6NKX1 122 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 BRI3O95415 125 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 IGHV3-23P01764 117 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 REG1AP05451 166 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 EIF4EP06730 217 aaKnown RBP7.98□□□□□ -1.13
CAPN1-225ENST00000533704 IL6RP08887 468 aaPredicted RBP7.98□□□□□ -1.13
CAPN1-225ENST00000533704 AREGP15514 252 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 PRSS3P35030 304 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 RFX2P48378 723 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 VBP1P61758 197 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 RPL8P62917 257 aaKnown RBP7.98□□□□□ -1.13
CAPN1-225ENST00000533704 OR4A47Q6IF82 309 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 ZNF818PQ6ZRF7 136 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 FAM223AQ8IWN6 122 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 PUSL1Q8N0Z8 303 aaKnown RBP7.98□□□□□ -1.13
CAPN1-225ENST00000533704 TTC9CQ8N5M4 171 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 NECAP1Q8NC96 275 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 ZBTB34Q8NCN2 500 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 DMBX1Q8NFW5 382 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 GIMAP1Q8WWP7 306 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 ZNF2Q9BSG1 426 aaPredicted RBP7.98□□□□□ -1.13
CAPN1-225ENST00000533704 FUNDC2Q9BWH2 189 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 FBXL7Q9UJT9 491 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 ZNF257Q9Y2Q1 563 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 S4R3C0 116 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 TENM3Q9P273 2699 aa7.98□□□□□ -1.13
CAPN1-225ENST00000533704 SMIM31A0A1B0GVY4 71 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 TEX22C9J3V5 150 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 PPP5D1E7EU14 171 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 E7EUB6 86 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 BMPR1BO00238 502 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 S1PR2O95136 353 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 IGLV1-51P01701 117 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 FRMD6-AS1P0C7T7 363 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 HLA-GP17693 338 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 MAS1LP35410 378 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 TAS2R46P59540 309 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 MSMO1Q15800 293 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 C15orf32Q32M92 178 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 SNX29P2Q8IUI4 249 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 SBSPONQ8IVN8 264 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 SLC25A46Q96AG3 418 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 AIFM2Q9BRQ8 373 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 SLC2A9Q9NRM0 540 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 PEMTQ9UBM1 199 aa7.97□□□□□ -1.13
CAPN1-225ENST00000533704 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.96□□□□□ -1.14
CAPN1-225ENST00000533704 TRBV9A0A0B4J1U6 114 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 TRAV3A0A0B4J244 114 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 A0A1B0GW64 132 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 NPIPB5A8MRT5 1133 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 RBFOX2O43251 390 aaKnown RBP eCLIP7.96□□□□□ -1.14
CAPN1-225ENST00000533704 NDUFB8O95169 186 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 DHFRP00374 187 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 HPRT1P00492 218 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 HLA-AP01891 365 aaKnown RBP7.96□□□□□ -1.14
CAPN1-225ENST00000533704 RLN1P04808 185 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 CSN3P07498 182 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 ZNF735P0CB33 412 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 DEFA4P12838 97 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 NQO2P16083 231 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 HLA-DMAP28067 261 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 PSMB6P28072 239 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 TAS2R31P59538 309 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 ERVK-16P61578 105 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 RNASE12Q5GAN4 147 aaKnown RBP7.96□□□□□ -1.14
CAPN1-225ENST00000533704 SGPP2Q8IWX5 399 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 OR4A5Q8NH83 315 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 DYNLRB2Q8TF09 96 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 BORCS5Q969J3 196 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 KCTD12Q96CX2 325 aaKnown RBP7.96□□□□□ -1.14
CAPN1-225ENST00000533704 COMMD5Q9GZQ3 224 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 TMEM140Q9NV12 185 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 BET1LQ9NYM9 111 aa7.96□□□□□ -1.14
CAPN1-225ENST00000533704 FAM25AB3EWG3 89 aa7.95□□□□□ -1.14
CAPN1-225ENST00000533704 FAM25CB3EWG5 89 aa7.95□□□□□ -1.14
CAPN1-225ENST00000533704 FAM25GB3EWG6 89 aa7.95□□□□□ -1.14
CAPN1-225ENST00000533704 H0Y980 276 aa7.95□□□□□ -1.14
CAPN1-225ENST00000533704 UPK2O00526 184 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms