RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 SECTM1Q8WVN6 248 aa12.23□□□□□ -0.45
CHMP4A-207ENST00000533523 SLC5A7Q9GZV3 580 aa12.23□□□□□ -0.45
CHMP4A-207ENST00000533523 C20orf85Q9H1P6 137 aa12.23□□□□□ -0.45
CHMP4A-207ENST00000533523 GNB4Q9HAV0 340 aa12.23□□□□□ -0.45
CHMP4A-207ENST00000533523 NUDT15Q9NV35 164 aa12.23□□□□□ -0.45
CHMP4A-207ENST00000533523 FLVCR2Q9UPI3 526 aa12.23□□□□□ -0.45
CHMP4A-207ENST00000533523 VSIG4Q9Y279 399 aa12.23□□□□□ -0.45
CHMP4A-207ENST00000533523 TRAV6A0A075B6T7 132 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 ARPC1BO15143 372 aaKnown RBP12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 H2AFB2P0C5Z0 115 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 OR8U9P0C7N5 309 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 INSL3P51460 131 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 UCP3P55916 312 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 ZNF616Q08AN1 781 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 MMDQ15546 238 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 SBSPONQ8IVN8 264 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 ZNF251Q9BRH9 671 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 ZNF221Q9UK13 617 aa12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 RBM7Q9Y580 266 aaKnown RBP12.22□□□□□ -0.45
CHMP4A-207ENST00000533523 RLN1P04808 185 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 IGF1P05019 195 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 LYL1P12980 280 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 MC5RP33032 325 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 GNB1P62873 340 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 SURF2Q15527 256 aaPredicted RBP12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 ASPHD1Q5U4P2 390 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 OR1N2Q8NGR9 330 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 ZFAND1Q8TCF1 268 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 MYOZ3Q8TDC0 251 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 ABHD14BQ96IU4 210 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 AGMATQ9BSE5 352 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 PARP11Q9NR21 331 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 RNF150Q9ULK6 438 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 GPR132Q9UNW8 380 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 WSB1Q9Y6I7 421 aa12.21□□□□□ -0.45
CHMP4A-207ENST00000533523 I3L521 148 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 ATP6V0E1O15342 81 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 NBR2O15453 112 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 SAP30O75446 220 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 CTSDP07339 412 aaPredicted RBP12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 PI3P19957 117 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 RPL39P5Q59GN2 51 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 SLC38A6Q8IZM9 456 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 MARVELD1Q9BSK0 173 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 RSRP1Q9BUV0 290 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 OR2D2Q9H210 308 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 KLK15Q9H2R5 256 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 CCL28Q9NRJ3 127 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 KIAA1456Q9P272 454 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 ZNF580Q9UK33 172 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 C14orf166Q9Y224 244 aaKnown RBP12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 WASHC3Q9Y3C0 194 aa12.2□□□□□ -0.46
CHMP4A-207ENST00000533523 LCE6AA0A183 80 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 INMT-MINDY4F8WBC2 141 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 G3V318 75 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 OVOL1O14753 267 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 CT45A6P0DMU7 189 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 CT45A5P0DMU8 189 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 CT45A7P0DMV0 189 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 GNRHRP30968 328 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 LPCAT3Q6P1A2 487 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 TMED4Q7Z7H5 227 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 ZNF429Q86V71 674 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 ZNF491Q8N8L2 437 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 DCUN1D4Q92564 292 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 UBE2E2Q96LR5 201 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 RTBDNQ9BSG5 229 aaPredicted RBP12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 C5orf66Q9H5L9 145 aa12.19□□□□□ -0.46
CHMP4A-207ENST00000533523 H0YJW9 148 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 GPR31O00270 319 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 APOA2P02652 100 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 FRMD6-AS1P0C7T7 363 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 ANXA7P20073 488 aaKnown RBP12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 RUNX1Q01196 453 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 PHLDA2Q53GA4 152 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 ZNF818PQ6ZRF7 136 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 ZNF645Q8N7E2 425 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 ADAD2Q8NCV1 583 aaKnown RBP12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 NPBQ8NG41 125 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 OR5AN1Q8NGI8 311 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 C5orf30Q96GV9 206 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 ZNF486Q96H40 463 aaPredicted RBP12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 RNF5Q99942 180 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 ALX4Q9H161 411 aaPredicted RBP12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 ZMAT4Q9H898 229 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 GAB2Q9UQC2 676 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 DNAH10Q8IVF4 4471 aa12.18□□□□□ -0.46
CHMP4A-207ENST00000533523 TRAV41A0A0B4J266 112 aa12.17□□□□□ -0.46
CHMP4A-207ENST00000533523 H7C2Y5 167 aa12.17□□□□□ -0.46
CHMP4A-207ENST00000533523 SLC22A5O76082 557 aa12.17□□□□□ -0.46
CHMP4A-207ENST00000533523 NDUFA3O95167 84 aa12.17□□□□□ -0.46
CHMP4A-207ENST00000533523 IGLV2-14P01704 120 aa12.17□□□□□ -0.46
CHMP4A-207ENST00000533523 HLA-DRB1P01911 266 aa12.17□□□□□ -0.46
CHMP4A-207ENST00000533523 CNTFRP26992 372 aa12.17□□□□□ -0.46
CHMP4A-207ENST00000533523 PPIFP30405 207 aaKnown RBP12.17□□□□□ -0.46
CHMP4A-207ENST00000533523 SLURP1P55000 103 aa12.17□□□□□ -0.46
CHMP4A-207ENST00000533523 PIGPP57054 158 aa12.17□□□□□ -0.46
CHMP4A-207ENST00000533523 TAS2R31P59538 309 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms