RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 FOXL1Q12952 345 aa13.82□□□□□ -0.2
NXF1-216ENST00000533499 FOXRED2Q8IWF2 684 aa13.82□□□□□ -0.2
NXF1-216ENST00000533499 LINC01006Q8NI28 216 aa13.82□□□□□ -0.2
NXF1-216ENST00000533499 GLYATL2Q8WU03 294 aa13.82□□□□□ -0.2
NXF1-216ENST00000533499 RRNAD1Q96FB5 475 aaKnown RBP13.82□□□□□ -0.2
NXF1-216ENST00000533499 ZNF430Q9H8G1 570 aaPredicted RBP13.82□□□□□ -0.2
NXF1-216ENST00000533499 FAM212BQ9NTI7 297 aaPredicted RBP13.82□□□□□ -0.2
NXF1-216ENST00000533499 RNF114Q9Y508 228 aa13.82□□□□□ -0.2
NXF1-216ENST00000533499 IGHV7-81A0A0B4J1V7 117 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 TRAV3A0A0B4J244 114 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 CLPSL1A2RUU4 121 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 CREBL2O60519 120 aaPredicted RBP13.81□□□□□ -0.2
NXF1-216ENST00000533499 RBMXL2O75526 392 aaKnown RBP13.81□□□□□ -0.2
NXF1-216ENST00000533499 SNAPC5O75971 98 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 SFT2D2O95562 160 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 IGKV1-39P01597 117 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 OPN1MWP04001 364 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 IGKV1D-39P04432 117 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 CRYGBP07316 175 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 OR4E1P0C645 316 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 OPN1MW2P0DN77 364 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 OPN1MW3P0DN78 364 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 SUPT4H1P63272 117 aaKnown RBP13.81□□□□□ -0.2
NXF1-216ENST00000533499 CX3CL1P78423 397 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 TMEM187Q14656 261 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 FXYD3Q14802 87 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 PRSS8Q16651 343 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 PLET1Q6UQ28 207 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 MMD2Q8IY49 270 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 NOL4LQ96MY1 436 aaPredicted RBP13.81□□□□□ -0.2
NXF1-216ENST00000533499 FAM103A1Q9BTL3 118 aaKnown RBP13.81□□□□□ -0.2
NXF1-216ENST00000533499 OR51J1Q9H342 316 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 C16orf95Q9H693 158 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 NSG2Q9Y328 171 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 WSB1Q9Y6I7 421 aa13.81□□□□□ -0.2
NXF1-216ENST00000533499 ATP6V0E1O15342 81 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 IGHG2P01859 326 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 UBE2MP61081 183 aaKnown RBP13.8□□□□□ -0.2
NXF1-216ENST00000533499 ECSCRQ19T08 205 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 SELENOHQ8IZQ5 122 aaKnown RBP13.8□□□□□ -0.2
NXF1-216ENST00000533499 PUSL1Q8N0Z8 303 aaKnown RBP13.8□□□□□ -0.2
NXF1-216ENST00000533499 LGI3Q8N145 548 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 OR4A16Q8NH70 328 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 LHFPL5Q8TAF8 219 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 TMEM167AQ8TBQ9 72 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 ARPC1AQ92747 370 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 GALNT14Q96FL9 552 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 FYTTD1Q96QD9 318 aaKnown RBP13.8□□□□□ -0.2
NXF1-216ENST00000533499 PHB2Q99623 299 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 PALMDQ9NP74 551 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 BET1LQ9NYM9 111 aa13.8□□□□□ -0.2
NXF1-216ENST00000533499 C9orf170A2RU37 121 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 TMEM89A2RUT3 159 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 AP4M1O00189 453 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 UPK2O00526 184 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 CDS2O95674 445 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 APELAP0DMC3 54 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 MYOD1P15172 320 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 SPNP16150 400 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 OR2B8PP59922 312 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 RPL8P62917 257 aaKnown RBP13.79□□□□□ -0.2
NXF1-216ENST00000533499 SRPXP78539 464 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 IZUMO4Q1ZYL8 232 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 AWAT1Q58HT5 328 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 C10orf55Q5SWW7 151 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 CENPVQ7Z7K6 275 aaPredicted RBP13.79□□□□□ -0.2
NXF1-216ENST00000533499 LYG2Q86SG7 212 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 KLHDC1Q8N7A1 406 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 OR52B4Q8NGK2 314 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 OR4A5Q8NH83 315 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 RBPMSQ93062 196 aaKnown RBP13.79□□□□□ -0.2
NXF1-216ENST00000533499 SEC22AQ96IW7 307 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 HINT2Q9BX68 163 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 TNCP24821 2201 aa13.79□□□□□ -0.2
NXF1-216ENST00000533499 INMT-MINDY4F8WBC2 141 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 IGKV1-5P01602 117 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 OR9G9P0C7N8 305 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 HLA-GP17693 338 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 VDAC1P21796 283 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 NDPQ00604 133 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 DHRS2Q13268 280 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 POU2AF1Q16633 256 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 ANKRD55Q3KP44 614 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 ZNF562Q6V9R5 426 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 C12orf54Q6X4T0 127 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 Q8N2B8 174 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 SLC35G3Q8N808 338 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 UXS1Q8NBZ7 420 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 SEC22CQ9BRL7 303 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 COMMD5Q9GZQ3 224 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 SERTAD4Q9NUC0 356 aa13.78□□□□□ -0.2
NXF1-216ENST00000533499 A0A1B0GUS0 222 aa13.77□□□□□ -0.21
NXF1-216ENST00000533499 UNQ5815/PRO19632Q6UWF5 114 aa13.77□□□□□ -0.21
NXF1-216ENST00000533499 LYZL2Q7Z4W2 148 aa13.77□□□□□ -0.21
NXF1-216ENST00000533499 ZNF329Q86UD4 541 aa13.77□□□□□ -0.21
NXF1-216ENST00000533499 C11orf44Q8N8P7 122 aa13.77□□□□□ -0.21
NXF1-216ENST00000533499 DUSP18Q8NEJ0 188 aa13.77□□□□□ -0.21
NXF1-216ENST00000533499 COQ8AQ8NI60 647 aa13.77□□□□□ -0.21
NXF1-216ENST00000533499 TMEM56Q96MV1 263 aa13.77□□□□□ -0.21
NXF1-216ENST00000533499 TMEM56-RWDD3S4R434 201 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms