RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 ZNF431Q8TF32 576 aaPredicted RBP16.79■□□□□ 0.28
PTP4A2-215ENST00000533408 LSM10Q969L4 123 aaKnown RBP16.79■□□□□ 0.28
PTP4A2-215ENST00000533408 SEC22AQ96IW7 307 aa16.79■□□□□ 0.28
PTP4A2-215ENST00000533408 GON7Q9BXV9 100 aa16.79■□□□□ 0.28
PTP4A2-215ENST00000533408 TMEM140Q9NV12 185 aa16.79■□□□□ 0.28
PTP4A2-215ENST00000533408 MMP24Q9Y5R2 645 aa16.79■□□□□ 0.28
PTP4A2-215ENST00000533408 A0A1B0GUS0 222 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 SNRPGP15A8MWD9 76 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 TSPAN9O75954 239 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 NDUFA7O95182 113 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 CNIH1O95406 144 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 IFNA21P01568 189 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 CRYGBP07316 175 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 CNTFRP26992 372 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 PRSS8Q16651 343 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 C9orf152Q5JTZ5 239 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 SSX9Q7RTT3 188 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 SELENOHQ8IZQ5 122 aaKnown RBP16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 PRNDQ9UKY0 176 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 TMED3Q9Y3Q3 217 aa16.78■□□□□ 0.28
PTP4A2-215ENST00000533408 UPK2O00526 184 aa16.77■□□□□ 0.28
PTP4A2-215ENST00000533408 RPL8P62917 257 aaKnown RBP16.77■□□□□ 0.28
PTP4A2-215ENST00000533408 SLC35E3Q7Z769 313 aa16.77■□□□□ 0.28
PTP4A2-215ENST00000533408 VKORC1L1Q8N0U8 176 aa16.77■□□□□ 0.28
PTP4A2-215ENST00000533408 Q8N2B8 174 aa16.77■□□□□ 0.28
PTP4A2-215ENST00000533408 OR4A16Q8NH70 328 aa16.77■□□□□ 0.28
PTP4A2-215ENST00000533408 MITD1Q8WV92 249 aa16.77■□□□□ 0.28
PTP4A2-215ENST00000533408 C16orf95Q9H693 158 aa16.77■□□□□ 0.28
PTP4A2-215ENST00000533408 BEX1Q9HBH7 125 aa16.77■□□□□ 0.28
PTP4A2-215ENST00000533408 RBMXL2O75526 392 aaKnown RBP16.76■□□□□ 0.27
PTP4A2-215ENST00000533408 IGHG2P01859 326 aa16.76■□□□□ 0.27
PTP4A2-215ENST00000533408 AMY1AP04745 511 aa16.76■□□□□ 0.27
PTP4A2-215ENST00000533408 RIPPLY3P57055 190 aa16.76■□□□□ 0.27
PTP4A2-215ENST00000533408 BLCAPP62952 87 aa16.76■□□□□ 0.27
PTP4A2-215ENST00000533408 TMEM267Q0VDI3 215 aaPredicted RBP16.76■□□□□ 0.27
PTP4A2-215ENST00000533408 COMMD5Q9GZQ3 224 aa16.76■□□□□ 0.27
PTP4A2-215ENST00000533408 IGKV1-39P01597 117 aa16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 IGKV1D-39P04432 117 aa16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 IL6RP08887 468 aaPredicted RBP16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 OXA1LQ15070 435 aa16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 FBLN7Q53RD9 439 aa16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 MRPL41Q8IXM3 137 aaKnown RBP16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 C12orf45Q8N5I9 185 aaPredicted RBP16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 SLC35G3Q8N808 338 aa16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 TMEM68Q96MH6 324 aa16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 CLCC1Q96S66 551 aa16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 SPIN2AQ99865 258 aa16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 SPIN2BQ9BPZ2 258 aa16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 OR51J1Q9H342 316 aa16.75■□□□□ 0.27
PTP4A2-215ENST00000533408 TEP1Q99973 2627 aaKnown RBP16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 AP4M1O00189 453 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 CA2P00918 260 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 HKR1P10072 659 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 HLA-GP17693 338 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 CX3CL1P78423 397 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 FOXL1Q12952 345 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 FXYD3Q14802 87 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 ANKRD55Q3KP44 614 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 THOC7Q6I9Y2 204 aaKnown RBP16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 CHPT1Q8WUD6 406 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 TMEM158Q8WZ71 300 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 PDCD10Q9BUL8 212 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 ZNF430Q9H8G1 570 aaPredicted RBP16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 ZNF580Q9UK33 172 aa16.74■□□□□ 0.27
PTP4A2-215ENST00000533408 A0A1B0GU03 582 aa16.73■□□□□ 0.27
PTP4A2-215ENST00000533408 SLC25A6P12236 298 aa16.73■□□□□ 0.27
PTP4A2-215ENST00000533408 VDAC2P45880 294 aaPredicted RBP16.73■□□□□ 0.27
PTP4A2-215ENST00000533408 TNXAQ16473 311 aa16.73■□□□□ 0.27
PTP4A2-215ENST00000533408 Q6ZSV7 163 aa16.73■□□□□ 0.27
PTP4A2-215ENST00000533408 HSD17B13Q7Z5P4 300 aaPredicted RBP16.73■□□□□ 0.27
PTP4A2-215ENST00000533408 OR5B3Q8NH48 314 aa16.73■□□□□ 0.27
PTP4A2-215ENST00000533408 ARPC1AQ92747 370 aa16.73■□□□□ 0.27
PTP4A2-215ENST00000533408 COA4Q9NYJ1 87 aa16.73■□□□□ 0.27
PTP4A2-215ENST00000533408 ZNF257Q9Y2Q1 563 aa16.73■□□□□ 0.27
PTP4A2-215ENST00000533408 FCN1O00602 326 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 IGKV1-5P01602 117 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 IGF1P05019 195 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 SULT1A3P0DMM9 295 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 SULT1A4P0DMN0 295 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 COMPP49747 757 aaPredicted RBP16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 GNB1P62873 340 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 LYZL2Q7Z4W2 148 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 ZNF429Q86V71 674 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 LHFPL5Q8TAF8 219 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 ABHD5Q8WTS1 349 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 SRSF8Q9BRL6 282 aaKnown RBP16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 SEC22CQ9BRL7 303 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 ZNF702PQ9H963 129 aa16.72■□□□□ 0.27
PTP4A2-215ENST00000533408 IGHV7-81A0A0B4J1V7 117 aa16.71■□□□□ 0.27
PTP4A2-215ENST00000533408 SPNP16150 400 aa16.71■□□□□ 0.27
PTP4A2-215ENST00000533408 SLC35B1P78383 322 aa16.71■□□□□ 0.27
PTP4A2-215ENST00000533408 RELBQ01201 579 aa16.71■□□□□ 0.27
PTP4A2-215ENST00000533408 TATDN3Q17R31 274 aa16.71■□□□□ 0.27
PTP4A2-215ENST00000533408 PRIMA1Q86XR5 153 aa16.71■□□□□ 0.27
PTP4A2-215ENST00000533408 UXS1Q8NBZ7 420 aa16.71■□□□□ 0.27
PTP4A2-215ENST00000533408 OR1L8Q8NGR8 309 aa16.71■□□□□ 0.27
PTP4A2-215ENST00000533408 RBMXL1Q96E39 390 aaKnown RBP16.71■□□□□ 0.27
PTP4A2-215ENST00000533408 FOXA2Q9Y261 457 aaPredicted RBP16.71■□□□□ 0.27
PTP4A2-215ENST00000533408 C15orf61A6NNL5 157 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms