RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 IGKV1D-13A0A0B4J2D9 117 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 IGLV2-14P01704 120 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 IGKV1-13P0DP09 117 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 EXOSC2Q13868 293 aaKnown RBP16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 C10orf55Q5SWW7 151 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 CASC10Q5T4H9 136 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 GTSCR1Q86UQ5 136 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 VKORC1L1Q8N0U8 176 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 Q8N402 240 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 NECAP1Q8NC96 275 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 BEST4Q8NFU0 473 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 AP3S1Q92572 193 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 TM2D3Q9BRN9 247 aa16.97■□□□□ 0.31
TRAPPC4-210ENST00000531290 TRBV9A0A0B4J1U6 114 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 LYL1P12980 280 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 ZNF45Q02386 682 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 MZT2AQ6P582 158 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 MFSD4AQ8N468 514 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 CMTM3Q96MX0 182 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 OR2A7Q96R45 310 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 TUBA4BQ9H853 241 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 PALMDQ9NP74 551 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 IFT46Q9NQC8 304 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 TAS2R8Q9NYW2 309 aa16.96■□□□□ 0.31
TRAPPC4-210ENST00000531290 DPPA5A6NC42 116 aa16.95■□□□□ 0.3
TRAPPC4-210ENST00000531290 GABARAPO95166 117 aa16.95■□□□□ 0.3
TRAPPC4-210ENST00000531290 FAM209BQ5JX69 171 aa16.95■□□□□ 0.3
TRAPPC4-210ENST00000531290 ZNF66Q6ZN08 573 aa16.95■□□□□ 0.3
TRAPPC4-210ENST00000531290 HOGA1Q86XE5 327 aa16.95■□□□□ 0.3
TRAPPC4-210ENST00000531290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-210ENST00000531290 HMX3A6NHT5 357 aa16.94■□□□□ 0.3
TRAPPC4-210ENST00000531290 BMPR1BO00238 502 aa16.94■□□□□ 0.3
TRAPPC4-210ENST00000531290 OR2J3O76001 311 aa16.94■□□□□ 0.3
TRAPPC4-210ENST00000531290 CTF1Q16619 201 aa16.94■□□□□ 0.3
TRAPPC4-210ENST00000531290 FYTTD1Q96QD9 318 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-210ENST00000531290 CITED4Q96RK1 184 aa16.94■□□□□ 0.3
TRAPPC4-210ENST00000531290 ZNF257Q9Y2Q1 563 aa16.94■□□□□ 0.3
TRAPPC4-210ENST00000531290 KBTBD11O94819 623 aa16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 HRASP01112 189 aa16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 APOA1P02647 267 aa16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 FCGR2CP31995 323 aa16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 MAS1LP35410 378 aa16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 RPL27AP46776 148 aaKnown RBP16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 TAS2R20P59543 309 aa16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 C15orf32Q32M92 178 aa16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 GVQW1Q8N7I0 195 aa16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 OR2K2Q8NGT1 345 aa16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 TMEM167AQ8TBQ9 72 aa16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 NAA50Q9GZZ1 169 aaKnown RBP16.93■□□□□ 0.3
TRAPPC4-210ENST00000531290 PTHLHP12272 177 aa16.92■□□□□ 0.3
TRAPPC4-210ENST00000531290 PRSS3P35030 304 aa16.92■□□□□ 0.3
TRAPPC4-210ENST00000531290 KIR2DS2P43631 304 aa16.92■□□□□ 0.3
TRAPPC4-210ENST00000531290 ALDH3B2P48448 385 aa16.92■□□□□ 0.3
TRAPPC4-210ENST00000531290 EIF4EBP1Q13541 118 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC4-210ENST00000531290 PUSL1Q8N0Z8 303 aaKnown RBP16.92■□□□□ 0.3
TRAPPC4-210ENST00000531290 SECTM1Q8WVN6 248 aa16.92■□□□□ 0.3
TRAPPC4-210ENST00000531290 AIFM2Q9BRQ8 373 aa16.92■□□□□ 0.3
TRAPPC4-210ENST00000531290 SLC2A9Q9NRM0 540 aa16.92■□□□□ 0.3
TRAPPC4-210ENST00000531290 FBXL7Q9UJT9 491 aa16.92■□□□□ 0.3
TRAPPC4-210ENST00000531290 IZUMO1RA6ND01 250 aa16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 NPIPB5A8MRT5 1133 aa16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 TEX22C9J3V5 150 aa16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 NOL3O60936 208 aaKnown RBP16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 DHFRP00374 187 aa16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 FCER2P06734 321 aa16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 IL6RP08887 468 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 ZNF182P17025 639 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 MECP2P51608 486 aaKnown RBP16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 BRWD1-AS2P59051 145 aa16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 SSX9Q7RTT3 188 aa16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 GPHA2Q96T91 129 aa16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 SPATA25Q9BR10 227 aa16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 CCL28Q9NRJ3 127 aa16.91■□□□□ 0.3
TRAPPC4-210ENST00000531290 MEIS3P1A6NDR6 274 aa16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 FAM25AB3EWG3 89 aa16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 FAM25CB3EWG5 89 aa16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 FAM25GB3EWG6 89 aa16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 TNFSF12O43508 249 aa16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 GGCTO75223 188 aaKnown RBP16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 EIF4EP06730 217 aaKnown RBP16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 MSMO1Q15800 293 aa16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 HAGHQ16775 308 aa16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 CLVS1Q8IUQ0 354 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 ZBTB34Q8NCN2 500 aa16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 OR5AP2Q8NGF4 316 aa16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 DYNLRB2Q8TF09 96 aa16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 THAP7Q9BT49 309 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC4-210ENST00000531290 PPP5D1E7EU14 171 aa16.89■□□□□ 0.29
TRAPPC4-210ENST00000531290 IFNA6P05013 189 aa16.89■□□□□ 0.29
TRAPPC4-210ENST00000531290 ZNF735P0CB33 412 aa16.89■□□□□ 0.29
TRAPPC4-210ENST00000531290 RPL8P62917 257 aaKnown RBP16.89■□□□□ 0.29
TRAPPC4-210ENST00000531290 SPAG16Q8N0X2 631 aa16.89■□□□□ 0.29
TRAPPC4-210ENST00000531290 ISOC1Q96CN7 298 aa16.89■□□□□ 0.29
TRAPPC4-210ENST00000531290 SLC5A7Q9GZV3 580 aa16.89■□□□□ 0.29
TRAPPC4-210ENST00000531290 DNAH7Q8WXX0 4024 aa16.88■□□□□ 0.29
TRAPPC4-210ENST00000531290 E7EUB6 86 aa16.88■□□□□ 0.29
TRAPPC4-210ENST00000531290 HPGDSO60760 199 aa16.88■□□□□ 0.29
TRAPPC4-210ENST00000531290 OR2C1O95371 312 aa16.88■□□□□ 0.29
TRAPPC4-210ENST00000531290 PPYP01298 95 aa16.88■□□□□ 0.29
TRAPPC4-210ENST00000531290 DEFA4P12838 97 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms