RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 FBXL12Q9NXK8 326 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 NAT8Q9UHE5 227 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 VPREB3Q9UKI3 123 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 OR51B2Q9Y5P1 312 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 ZCCHC11Q5TAX3 1644 aaKnown RBP2.26□□□□□ -2.05
CTR9-204ENST00000529355 TIAM1Q13009 1591 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 FER1L6Q2WGJ9 1857 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 ABCC6O95255 1503 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 KIAA0586Q9BVV6 1533 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 XIRP1Q702N8 1843 aaKnown RBP2.26□□□□□ -2.05
CTR9-204ENST00000529355 CFTRP13569 1480 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 BCL9LQ86UU0 1499 aa2.26□□□□□ -2.05
CTR9-204ENST00000529355 PHLPP1O60346 1717 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 PTPN23Q9H3S7 1636 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 PTPRJQ12913 1337 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 MEIKINA0A087WXM9 373 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 TRAV38-1A0A0B4J264 116 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 EXOC1LA0A1B0GW35 172 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 OR5H1A6NKK0 313 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 CLDN24A6NM45 220 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 LYRM9A8MSI8 78 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 ZNF878C9JN71 531 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 E7EQ34 232 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 G3V3Q6 166 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 SIRPB1O00241 398 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 TNFRSF11BO00300 401 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 DEGS1O15121 323 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 CCL25O15444 150 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 MFSD11O43934 449 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 FCN3O75636 299 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 HAND1O96004 215 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 HBZP02008 142 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 APOA2P02652 100 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 OPN1SWP03999 348 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 NMBP08949 121 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 SULT1A3P0DMM9 295 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 SULT1A4P0DMN0 295 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 LIPCP11150 499 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 TAC1P20366 129 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 APLNRP35414 380 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 POLR2IP36954 125 aaKnown RBP2.25□□□□□ -2.05
CTR9-204ENST00000529355 GPR1P46091 355 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 GNG4P50150 75 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 HCCSP53701 268 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 TAS2R30P59541 319 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 RHOBP62745 196 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 RHOGP84095 191 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 RUNX1Q01196 453 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 C2orf80Q0P641 193 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 OR1Q1Q15612 314 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 HIST3H3Q16695 136 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 TCEAL5Q5H9L2 206 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 LDLRAD2Q5SZI1 272 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 C1orf194Q5T5A4 169 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 HENMT1Q5T8I9 393 aaKnown RBP2.25□□□□□ -2.05
CTR9-204ENST00000529355 ZFAND6Q6FIF0 208 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 AGTRAPQ6RW13 159 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 GTF2H5Q6ZYL4 71 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 HIST2H3AQ71DI3 136 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 CMC1Q7Z7K0 106 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 TMEM25Q86YD3 366 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 LRRC25Q8N386 305 aaPredicted RBP2.25□□□□□ -2.05
CTR9-204ENST00000529355 TCTEX1D1Q8N7M0 179 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 TMEM105Q8N8V8 129 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 LINC00304Q8N9R0 145 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 ST6GALNAC3Q8NDV1 305 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 OR51E1Q8TCB6 317 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 HAVCR2Q8TDQ0 301 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 RTN4IP1Q8WWV3 396 aaPredicted RBP2.25□□□□□ -2.05
CTR9-204ENST00000529355 RAB8BQ92930 207 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 HIST1H2BAQ96A08 127 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 SMIM19Q96E16 107 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 DYNLL2Q96FJ2 89 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 ZNF75AQ96N20 296 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 C18orf15Q96N68 181 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 RBP7Q96R05 134 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 TBX5Q99593 518 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 CDX2Q99626 313 aaPredicted RBP2.25□□□□□ -2.05
CTR9-204ENST00000529355 HSPB9Q9BQS6 159 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 GINS3Q9BRX5 216 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 MARVELD1Q9BSK0 173 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 THTPAQ9BU02 230 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 ZNF471Q9BX82 626 aaPredicted RBP2.25□□□□□ -2.05
CTR9-204ENST00000529355 SEC11CQ9BY50 192 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 OR51I1Q9H343 314 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 PRO1933Q9H354 126 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 ACP6Q9NPH0 428 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 MRPL16Q9NX20 251 aaKnown RBP2.25□□□□□ -2.05
CTR9-204ENST00000529355 MRPL27Q9P0M9 148 aaKnown RBP2.25□□□□□ -2.05
CTR9-204ENST00000529355 COMMD3Q9UBI1 195 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 OPTCQ9UBM4 332 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 SS18L2Q9UHA2 77 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 HSPB8Q9UJY1 196 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 RAB22AQ9UL26 194 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 RNF11Q9Y3C5 154 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 DOCK2Q92608 1830 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 ZFYVE16Q7Z3T8 1539 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 SHANK3Q9BYB0 1731 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 MROH2AA6NES4 1674 aa2.25□□□□□ -2.05
CTR9-204ENST00000529355 ZNF142P52746 1687 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms