RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 OR51E1Q8TCB6 317 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 RXFP2Q8WXD0 754 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 ACY3Q96HD9 319 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 FMC1Q96HJ9 113 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 DERL3Q96Q80 235 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 PLEKHF1Q96S99 279 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 GPR21Q99679 349 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 NAA38Q9BRA0 125 aaKnown RBP2.36□□□□□ -2.03
CD44-229ENST00000528672 PYGO2Q9BRQ0 406 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 DERL1Q9BUN8 251 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 SAMD10Q9BYL1 202 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 CXorf21Q9HAI6 301 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 PCYOX1Q9UHG3 505 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 HEBP2Q9Y5Z4 205 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 UBIAD1Q9Y5Z9 338 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 KCNE3Q9Y6H6 103 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 NRXN1Q9ULB1 1477 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 CHD4Q14839 1912 aa2.36□□□□□ -2.03
CD44-229ENST00000528672 INO80Q9ULG1 1556 aaPredicted RBP2.36□□□□□ -2.03
CD44-229ENST00000528672 MYO5BQ9ULV0 1848 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 HFM1A2PYH4 1435 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 NSD3Q9BZ95 1437 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 MYH3P11055 1940 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 MYH7P12883 1935 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 PZPP20742 1482 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 IGKV3D-20A0A0C4DH25 116 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 LOC107984640A0A0U1RRK4 108 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 A0A1W2PRS3 328 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 DHRS12A0PJE2 317 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 A6NDN8 102 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 TMEM212A6NML5 194 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 KRTAP4-16G5E9R7 235 aaPredicted RBP2.35□□□□□ -2.03
CD44-229ENST00000528672 K7EQS6 105 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 PEX7O00628 323 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 DHRS3O75911 302 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 IGHG2P01859 326 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 SHBGP04278 402 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 NMBP08949 121 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 MRPL3P09001 348 aaKnown RBP2.35□□□□□ -2.03
CD44-229ENST00000528672 IGLC1P0CG04 106 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 PGA4P0DJD7 388 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 PGA3P0DJD8 388 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 OR12D1P0DN82 309 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 CPMP14384 443 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 MARCKSL1P49006 195 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 GNG11P61952 73 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 ENDOGQ14249 297 aaKnown RBP2.35□□□□□ -2.03
CD44-229ENST00000528672 BATFQ16520 125 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 CCL15Q16663 113 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 KHDC3LQ587J8 217 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 SLC25A30Q5SVS4 291 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 FAM201AQ5SY85 155 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 C9orf129Q5T035 196 aaKnown RBP2.35□□□□□ -2.03
CD44-229ENST00000528672 NXNL2Q5VZ03 156 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 EIF5AL1Q6IS14 154 aaKnown RBP2.35□□□□□ -2.03
CD44-229ENST00000528672 ZNF705AQ6ZN79 300 aaPredicted RBP2.35□□□□□ -2.03
CD44-229ENST00000528672 TGIF2LYQ8IUE0 185 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 C20orf196Q8IYI0 205 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 OR51A4Q8NGJ6 313 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 OR10J6PQ8NGY7 276 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 RAB2BQ8WUD1 216 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 STARD4Q96DR4 205 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 SLAMF6Q96DU3 332 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 ADAT3Q96EY9 351 aaPredicted RBP2.35□□□□□ -2.03
CD44-229ENST00000528672 CARD19Q96LW7 228 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 OR4C12Q96R67 309 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 S100A13Q99584 98 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 PRADC1Q9BSG0 188 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 EMC6Q9BV81 110 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 CHST6Q9GZX3 395 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 PBOV1Q9GZY1 135 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 SLC25A31Q9H0C2 315 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 OR51E2Q9H255 320 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 NOX3Q9HBY0 568 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 NUFIP1Q9UHK0 495 aaKnown RBP2.35□□□□□ -2.03
CD44-229ENST00000528672 CYSLTR1Q9Y271 337 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 YTHDF2Q9Y5A9 579 aaKnown RBP2.35□□□□□ -2.03
CD44-229ENST00000528672 ORC6Q9Y5N6 252 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 ROBO3Q96MS0 1386 aa2.35□□□□□ -2.03
CD44-229ENST00000528672 KDM6AO15550 1401 aaPredicted RBP2.34□□□□□ -2.03
CD44-229ENST00000528672 NPHP4O75161 1426 aaPredicted RBP2.34□□□□□ -2.03
CD44-229ENST00000528672 MYH10P35580 1976 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 GOLGA3Q08378 1498 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 CACNA1GO43497 2377 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 PHIPQ8WWQ0 1821 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 TMED7-TICAM2A0A0A6YYA0 188 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 A0A0U1RQV1 116 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 TEX50A0A1B0GTY4 177 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 C5orf63A6NC05 138 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 RBFOX3A6NFN3 312 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 CCDC179H3BU77 68 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 J3QR89 54 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 CDC42EP2O14613 210 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 OVOL1O14753 267 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 NPIPB7O75200 414 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 PGLYRP1O75594 196 aaPredicted RBP2.34□□□□□ -2.03
CD44-229ENST00000528672 NDUFC2O95298 119 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 EPPINO95925 133 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 IGHMP01871 453 aa2.34□□□□□ -2.03
CD44-229ENST00000528672 EIF4EP06730 217 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms