RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ZNF146Q15072 292 aa12.21□□□□□ -0.45
CAPN1-214ENST00000528165 KIAA1644Q3SXP7 199 aa12.21□□□□□ -0.45
CAPN1-214ENST00000528165 MS4A5Q9H3V2 200 aa12.21□□□□□ -0.45
CAPN1-214ENST00000528165 CEP192Q8TEP8 1941 aa12.21□□□□□ -0.45
CAPN1-214ENST00000528165 TRGV10A0A0A0MS01 117 aa12.21□□□□□ -0.46
CAPN1-214ENST00000528165 IGHV3-64DA0A0J9YX35 117 aa12.21□□□□□ -0.46
CAPN1-214ENST00000528165 CDIPTO14735 213 aa12.21□□□□□ -0.46
CAPN1-214ENST00000528165 CEBPDP49716 269 aaPredicted RBP12.21□□□□□ -0.46
CAPN1-214ENST00000528165 RBX1P62877 108 aa12.21□□□□□ -0.46
CAPN1-214ENST00000528165 WDR86Q86TI4 376 aa12.21□□□□□ -0.46
CAPN1-214ENST00000528165 C11orf52Q96A22 123 aa12.21□□□□□ -0.46
CAPN1-214ENST00000528165 RCHY1Q96PM5 261 aa12.21□□□□□ -0.46
CAPN1-214ENST00000528165 GTF3C1Q12789 2109 aa12.21□□□□□ -0.46
CAPN1-214ENST00000528165 LY6G6EA0A0G2JKS1 128 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 NKX6-3A6NJ46 265 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 LINC00473A8K010 186 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 ZNF324O75467 553 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-214ENST00000528165 ZNF83P51522 516 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 LINC00205P59089 165 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 COTL1Q14019 142 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 WDR31Q8NA23 367 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 ZNF784Q8NCA9 323 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-214ENST00000528165 SSMEM1Q8WWF3 244 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 WNT10AQ9GZT5 417 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 HEYLQ9NQ87 328 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-214ENST00000528165 U3KQA8 63 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 OOEPA6NGQ2 149 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 HAND1O96004 215 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 MT-CO3P00414 261 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 C3orf79P0CE67 100 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 SRFP11831 508 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 FOLR3P41439 243 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 PRRX1P54821 245 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 CX3CL1P78423 397 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 SAPCD1Q5SSQ6 148 aa12.2□□□□□ -0.46
CAPN1-214ENST00000528165 PSPNO60542 156 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 OR9G9P0C7N8 305 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 GNG4P50150 75 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 COX19Q49B96 90 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 BORCS7Q96B45 105 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 HSD17B10Q99714 261 aaKnown RBP12.19□□□□□ -0.46
CAPN1-214ENST00000528165 SRIP30626 198 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 HINT1P49773 126 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-214ENST00000528165 CLDN18P56856 261 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 RHOBP62745 196 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 UBE2V1Q13404 147 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 RAB30Q15771 203 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 TMEM136Q6ZRR5 245 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 PINLYPA6NC86 204 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 SLC35B1P78383 322 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 AESQ08117 197 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 PRAMEF5Q5TYX0 476 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 PRAMEF6Q5VXH4 476 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 ZNF738Q8NE65 137 aa12.19□□□□□ -0.46
CAPN1-214ENST00000528165 SEPSECSQ9HD40 501 aaKnown RBP12.19□□□□□ -0.46
CAPN1-214ENST00000528165 CACNA1DQ01668 2161 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 TSPOP30536 169 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 OR1C1Q15619 314 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 EFNB3Q15768 340 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 CENPWQ5EE01 88 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 SPATA31B1PQ5VZV4 182 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 OR4A16Q8NH70 328 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 MRGPRDQ8TDS7 321 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 SLC35D1Q9NTN3 355 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 BET1LQ9NYM9 111 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 KMT2EQ8IZD2 1858 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 REG1AP05451 166 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 NTF3P20783 257 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 C19orf35Q6ZS72 473 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 FAM19A2Q8N3H0 131 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 PSG11Q9UQ72 335 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 COX11Q9Y6N1 276 aa12.18□□□□□ -0.46
CAPN1-214ENST00000528165 CEP290O15078 2479 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 WDFY3Q8IZQ1 3526 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 HELTA6NFD8 242 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 ITGB1BP1O14713 200 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 FOXH1O75593 365 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 WISP2O76076 250 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 GRPP07492 148 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 GABRA2P47869 451 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 TCL1AP56279 114 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 TMPRSS3P57727 454 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 STUMQ69YW2 141 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 UNQ5815/PRO19632Q6UWF5 114 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 NIT1Q86X76 327 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 DOLPP1Q86YN1 238 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 ATOH7Q8N100 152 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 OR4P4Q8NGL7 312 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 PHF7Q9BWX1 381 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-214ENST00000528165 MRPS16Q9Y3D3 137 aaKnown RBP12.17□□□□□ -0.46
CAPN1-214ENST00000528165 IGHV3-43A0A0B4J1X8 118 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 HLA-DQA1P01909 254 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 OR10J4P0C629 311 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 IGHV3-43DP0DP04 118 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 CYB561P49447 251 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 SLC35E4Q6ICL7 350 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 PQLC2Q6ZP29 291 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 GCNT2Q8N0V5 402 aa12.17□□□□□ -0.46
CAPN1-214ENST00000528165 RNASE7Q9H1E1 156 aaKnown RBP12.17□□□□□ -0.46
CAPN1-214ENST00000528165 NPVFQ9HCQ7 196 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms