RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ABCA11PQ4W5N1 156 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 OR2B11Q5JQS5 317 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 ZNF57Q68EA5 555 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-204ENST00000526430 KCTD9Q7L273 389 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 TBC1D26Q86UD7 250 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 OR8H1Q8NGG4 311 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 FLYWCH2Q96CP2 140 aaKnown RBP8.52□□□□□ -1.05
NEDD8-204ENST00000526430 ZNF486Q96H40 463 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-204ENST00000526430 PRRT1Q99946 306 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 HSPB9Q9BQS6 159 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 FBXL15Q9H469 300 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 MOB4Q9Y3A3 225 aa8.52□□□□□ -1.05
NEDD8-204ENST00000526430 H7C2Y5 167 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 RRHO14718 337 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 NBR2O15453 112 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 RBFOX2O43251 390 aaKnown RBP eCLIP8.51□□□□□ -1.05
NEDD8-204ENST00000526430 IGHG2P01859 326 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 RRASP10301 218 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 LGALS7P47929 136 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 PIGPP57054 158 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 AP3S2P59780 193 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 RPS16P62249 146 aaKnown RBP8.51□□□□□ -1.05
NEDD8-204ENST00000526430 DHODHQ02127 395 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 POU2AF1Q16633 256 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 C5orf64Q2M2E5 130 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 TRIQKQ629K1 86 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 VKORC1L1Q8N0U8 176 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 SPAG16Q8N0X2 631 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 PUSL1Q8N0Z8 303 aaKnown RBP8.51□□□□□ -1.05
NEDD8-204ENST00000526430 OR4X2Q8NGF9 303 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 OR51H1Q8NH63 302 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 GLYATL2Q8WU03 294 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 TCTEX1D2Q8WW35 142 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 TP53RKQ96S44 253 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 WDR12Q9GZL7 423 aaKnown RBP8.51□□□□□ -1.05
NEDD8-204ENST00000526430 LIN7CQ9NUP9 197 aaKnown RBP8.51□□□□□ -1.05
NEDD8-204ENST00000526430 MCUBQ9NWR8 336 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 FLVCR2Q9UPI3 526 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 FBXO7Q9Y3I1 522 aa8.51□□□□□ -1.05
NEDD8-204ENST00000526430 IGHV7-81A0A0B4J1V7 117 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 TRAV3A0A0B4J244 114 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 NAP1L6A6NFF2 107 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 NCBP2LA6PVI3 153 aaKnown RBP8.5□□□□□ -1.05
NEDD8-204ENST00000526430 ARPC1BO15143 372 aaKnown RBP8.5□□□□□ -1.05
NEDD8-204ENST00000526430 LYRM1O43325 122 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 NDUFB6O95139 128 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 APOA2P02652 100 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 SLC6A1P30531 599 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 LPAR6P43657 344 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 NDPQ00604 133 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 MMDQ15546 238 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 CENPVQ7Z7K6 275 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-204ENST00000526430 SBSPONQ8IVN8 264 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 LHFPL5Q8TAF8 219 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 OSR1Q8TAX0 266 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-204ENST00000526430 ZFAND1Q8TCF1 268 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 PRR25Q96S07 402 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 C7orf50Q9BRJ6 194 aaKnown RBP8.5□□□□□ -1.05
NEDD8-204ENST00000526430 SCP2D1Q9UJQ7 156 aa8.5□□□□□ -1.05
NEDD8-204ENST00000526430 C3orf85A0A1B0GTC6 90 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 A0A1B0GW64 132 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 CRYM-AS1A6NIL9 109 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 E7EUB6 86 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 M0QZK8 103 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 SLC25A17O43808 307 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 S1PR2O95136 353 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 HPRT1P00492 218 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 HLA-DRB1P01911 266 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 P0C879 139 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 PGAM2P15259 253 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 UBE2KP61086 200 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 CX3CL1P78423 397 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 ASAH1Q13510 395 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 RTL8BQ17RB0 113 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 SP6Q3SY56 376 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 C19orf54Q5BKX5 351 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 LIN54Q6MZP7 749 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 C10orf99Q6UWK7 81 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 CMTM1Q8IZ96 169 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 TEX45Q8NA69 505 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 BORCS5Q969J3 196 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 SEC22AQ96IW7 307 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 HARBI1Q96MB7 349 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 SLC25A21Q9BQT8 299 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-204ENST00000526430 EDA2RQ9HAV5 297 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 PLEKHA2Q9HB19 425 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 FAM212BQ9NTI7 297 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-204ENST00000526430 PRR13Q9NZ81 148 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 METTL1Q9UBP6 276 aaKnown RBP8.49□□□□□ -1.05
NEDD8-204ENST00000526430 PRELID3BQ9Y3B1 194 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 SMAD5-AS1Q9Y6J3 95 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 HECTD4Q9Y4D8 3996 aa8.49□□□□□ -1.05
NEDD8-204ENST00000526430 CGB1A6NKQ9 187 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 H0Y980 276 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 SHOXO15266 292 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 SPDEFO95238 335 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 CDS2O95674 445 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 IGKV1-5P01602 117 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 OR5AC1P0C628 307 aa8.48□□□□□ -1.05
NEDD8-204ENST00000526430 SAA1P0DJI8 122 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms