RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 Q8N402 240 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 TCTEX1D1Q8N7M0 179 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 TEX45Q8NA69 505 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 OR4D10Q8NGI6 311 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 OR4S2Q8NH73 311 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 ZNF486Q96H40 463 aaPredicted RBP9.74□□□□□ -0.85
SMCO4-202ENST00000525141 AIFM2Q9BRQ8 373 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 GNB4Q9HAV0 340 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 NUBP2Q9Y5Y2 271 aa9.74□□□□□ -0.85
SMCO4-202ENST00000525141 DISC1C4P0D8 188 aa9.73□□□□□ -0.85
SMCO4-202ENST00000525141 VDAC1P21796 283 aa9.73□□□□□ -0.85
SMCO4-202ENST00000525141 RAB9AP51151 201 aa9.73□□□□□ -0.85
SMCO4-202ENST00000525141 CRIP2P52943 208 aaPredicted RBP9.73□□□□□ -0.85
SMCO4-202ENST00000525141 CX3CL1P78423 397 aa9.73□□□□□ -0.85
SMCO4-202ENST00000525141 FHL3Q13643 280 aa9.73□□□□□ -0.85
SMCO4-202ENST00000525141 VMA21Q3ZAQ7 101 aa9.73□□□□□ -0.85
SMCO4-202ENST00000525141 SPAG16Q8N0X2 631 aa9.73□□□□□ -0.85
SMCO4-202ENST00000525141 POC5Q8NA72 575 aa9.73□□□□□ -0.85
SMCO4-202ENST00000525141 DEDD2Q8WXF8 326 aa9.73□□□□□ -0.85
SMCO4-202ENST00000525141 GPHA2Q96T91 129 aa9.73□□□□□ -0.85
SMCO4-202ENST00000525141 FAM212BQ9NTI7 297 aaPredicted RBP9.73□□□□□ -0.85
SMCO4-202ENST00000525141 TRAV41A0A0B4J266 112 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 HPRT1P00492 218 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 HRASP01112 189 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 F2RP25116 425 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 ECI1P42126 302 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 AP3S2P59780 193 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 TMEM267Q0VDI3 215 aaPredicted RBP9.72□□□□□ -0.85
SMCO4-202ENST00000525141 GDPD1Q8N9F7 314 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 OR11H1Q8NG94 326 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 OR4C16Q8NGL9 310 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 ZFAND1Q8TCF1 268 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 C4orf3Q8WVX3 66 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 UBE2E2Q96LR5 201 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 PRRT1Q99946 306 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 MCRIP2Q9BUT9 160 aaKnown RBP9.72□□□□□ -0.85
SMCO4-202ENST00000525141 PLEKHA2Q9HB19 425 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 TPSG1Q9NRR2 321 aa9.72□□□□□ -0.85
SMCO4-202ENST00000525141 RAMP3O60896 148 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 RLN1P04808 185 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 TAS2R31P59538 309 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 RND3P61587 244 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 GNB1P62873 340 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 RUNX1Q01196 453 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 ZNF45Q02386 682 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 SURF2Q15527 256 aaPredicted RBP9.71□□□□□ -0.86
SMCO4-202ENST00000525141 POU2AF1Q16633 256 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 CNPY1Q3B7I2 92 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 SCGB2B2Q4G0G5 96 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 AKIRIN2Q53H80 203 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 OR2B11Q5JQS5 317 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 OR1N2Q8NGR9 330 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 OR51H1Q8NH63 302 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 VSTM2AQ8TAG5 236 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 CASTOR1Q8WTX7 329 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 TRIM63Q969Q1 353 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 RHOVQ96L33 236 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 OR5B12Q96R08 314 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 CLCC1Q96S66 551 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 SRRQ9GZT4 340 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 PARP11Q9NR21 331 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 SLC2A8Q9NY64 477 aa9.71□□□□□ -0.86
SMCO4-202ENST00000525141 LSM4Q9Y4Z0 139 aaKnown RBP9.71□□□□□ -0.86
SMCO4-202ENST00000525141 CREBL2O60519 120 aaPredicted RBP9.7□□□□□ -0.86
SMCO4-202ENST00000525141 OR2A4O95047 310 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 CA2P00918 260 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 SAA1P0DJI8 122 aaPredicted RBP9.7□□□□□ -0.86
SMCO4-202ENST00000525141 PGAM2P15259 253 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 NQO2P16083 231 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 FAUP35544 74 aaKnown RBP9.7□□□□□ -0.86
SMCO4-202ENST00000525141 RAB25P57735 213 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 SSBP2P81877 361 aaPredicted RBP9.7□□□□□ -0.86
SMCO4-202ENST00000525141 PJVKQ0ZLH3 352 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 KLF9Q13886 244 aaPredicted RBP9.7□□□□□ -0.86
SMCO4-202ENST00000525141 FXYD3Q14802 87 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 PRSS8Q16651 343 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 MRGPRG-AS1Q2M3A8 158 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 PHLDA2Q53GA4 152 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 C11orf87Q6NUJ2 197 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 FAAP20Q6NZ36 180 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 MMD2Q8IY49 270 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 PUSL1Q8N0Z8 303 aaKnown RBP9.7□□□□□ -0.86
SMCO4-202ENST00000525141 CADM3Q8N126 398 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 TOMM5Q8N4H5 51 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 OR51S1Q8NGJ8 323 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 MRGPRFQ96AM1 343 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 OR2A7Q96R45 310 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 ALX4Q9H161 411 aaPredicted RBP9.7□□□□□ -0.86
SMCO4-202ENST00000525141 SLC2A9Q9NRM0 540 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 COMMD9Q9P000 198 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 SCP2D1Q9UJQ7 156 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 VSIG4Q9Y279 399 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 SORL1Q92673 2214 aa9.7□□□□□ -0.86
SMCO4-202ENST00000525141 ARPC1BO15143 372 aaKnown RBP9.69□□□□□ -0.86
SMCO4-202ENST00000525141 MPPED1O15442 326 aa9.69□□□□□ -0.86
SMCO4-202ENST00000525141 CNIH1O95406 144 aa9.69□□□□□ -0.86
SMCO4-202ENST00000525141 CTSDP07339 412 aaPredicted RBP9.69□□□□□ -0.86
SMCO4-202ENST00000525141 IL6RP08887 468 aaPredicted RBP9.69□□□□□ -0.86
SMCO4-202ENST00000525141 FGF2P09038 288 aa9.69□□□□□ -0.86
SMCO4-202ENST00000525141 MAS1LP35410 378 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms