RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 KIR2DS2P43631 304 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 UQCRFS1P47985 274 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 PPOXP50336 477 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 TMEM33P57088 247 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 ERVK-16P61578 105 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 POLR2GP62487 172 aaKnown RBP eCLIP5.3□□□□□ -1.56
LINC00534-203ENST00000523406 RPL23AP62750 156 aaKnown RBP5.3□□□□□ -1.56
LINC00534-203ENST00000523406 ZNF816Q0VGE8 651 aaPredicted RBP5.3□□□□□ -1.56
LINC00534-203ENST00000523406 ODF3L2Q3SX64 289 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 ZNF585BQ52M93 769 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 PRAMEF5Q5TYX0 476 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 H2BFWTQ7Z2G1 175 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 FGFRL1Q8N441 504 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 NRACQ8N912 160 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 CLEC18CQ8NCF0 446 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 STOML3Q8TAV4 291 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 LRRC20Q8TCA0 184 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 CORO2AQ92828 525 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 LEAP2Q969E1 77 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 TIMD4Q96H15 378 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 RAB40CQ96S21 281 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 S1PR3Q99500 378 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 TMEM204Q9BSN7 226 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 KRTAP4-2Q9BYR5 136 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 FAM212BQ9NTI7 297 aaPredicted RBP5.3□□□□□ -1.56
LINC00534-203ENST00000523406 CBLN4Q9NTU7 201 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 SDHAF2Q9NX18 166 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 TAS2R3Q9NYW6 316 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 CACNG5Q9UF02 275 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 FBXL17Q9UF56 701 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 MMP24Q9Y5R2 645 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 LINC00312Q9Y6C7 94 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 SESN1Q9Y6P5 492 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 DYSFO75923 2080 aa5.3□□□□□ -1.56
LINC00534-203ENST00000523406 RPS10-NUDT3A0A1W2PQS6 291 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 FAM24AA6NFZ4 105 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 C17orf98A8MV24 154 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 DVL1O14640 695 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 ITGB1BP1O14713 200 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 RAB29O14966 203 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 CHST1O43916 411 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 PAGE4O60829 102 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 FCGR3BO75015 233 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 MED6O75586 246 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 S1PR2O95136 353 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 IGKV1-39P01597 117 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 IGKV1-5P01602 117 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 GAPDHP04406 335 aaKnown RBP5.29□□□□□ -1.56
LINC00534-203ENST00000523406 IGKV1D-39P04432 117 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 G6PCP35575 357 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 RPL30P62888 115 aaKnown RBP5.29□□□□□ -1.56
LINC00534-203ENST00000523406 MRPS11P82912 194 aaKnown RBP5.29□□□□□ -1.56
LINC00534-203ENST00000523406 TFF3Q07654 80 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 C17orf58Q2M2W7 97 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 FAM74A1Q5RGS3 127 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 RPL7L1Q6DKI1 246 aaKnown RBP5.29□□□□□ -1.56
LINC00534-203ENST00000523406 STX12Q86Y82 276 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 LYG1Q8N1E2 194 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.29□□□□□ -1.56
LINC00534-203ENST00000523406 DMBX1Q8NFW5 382 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 OR10A7Q8NGE5 316 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 TMED6Q8WW62 240 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 ITLN2Q8WWU7 325 aaPredicted RBP5.29□□□□□ -1.56
LINC00534-203ENST00000523406 RAB1CQ92928 201 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 ADTRPQ96IZ2 230 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 ZNF714Q96N38 554 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 AGMATQ9BSE5 352 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 CYTL1Q9NRR1 136 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.29□□□□□ -1.56
LINC00534-203ENST00000523406 C19orf12Q9NSK7 152 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 KAAG1Q9UBP8 84 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 RPUSD1Q9UJJ7 312 aaKnown RBP5.29□□□□□ -1.56
LINC00534-203ENST00000523406 FAM96BQ9Y3D0 163 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 CACNA1BQ00975 2339 aa5.29□□□□□ -1.56
LINC00534-203ENST00000523406 HIVEP3Q5T1R4 2406 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 A0A0G2JRQ6 117 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 A0A1W2PPE3 182 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 LEUTXA8MZ59 168 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 USP17L23D6RBM5 183 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 FAM90A26D6RGX4 464 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 LYNX1G3V0Z9 82 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 TOR1AO14656 332 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 PPIHO43447 177 aaKnown RBP5.28□□□□□ -1.56
LINC00534-203ENST00000523406 SYNGR2O43760 224 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 RAMP3O60896 148 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 PITX3O75364 302 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 HPRT1P00492 218 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 NMBP08949 121 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 LYNX1P0DP58 116 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 RRASP10301 218 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 DAOP14920 347 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 COL8A2P25067 703 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 LOXP28300 417 aaPredicted RBP5.28□□□□□ -1.56
LINC00534-203ENST00000523406 DUTP33316 252 aaKnown RBP5.28□□□□□ -1.56
LINC00534-203ENST00000523406 THBS3P49746 956 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 GNG10P50151 68 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 EWSR1Q01844 656 aaKnown RBP eCLIP5.28□□□□□ -1.56
LINC00534-203ENST00000523406 BAXQ07812 192 aa5.28□□□□□ -1.56
LINC00534-203ENST00000523406 EIF4EBP1Q13541 118 aaPredicted RBP5.28□□□□□ -1.56
LINC00534-203ENST00000523406 TWIST1Q15672 202 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms