RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 IRF3Q14653 427 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 DEFB135Q30KP9 77 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 UNQ9165/PRO28630Q6UXU0 137 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 KCTD9Q7L273 389 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 ZNF645Q8N7E2 425 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 OR10R2Q8NGX6 335 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 FYTTD1Q96QD9 318 aaKnown RBP16.89■□□□□ 0.29
PVT1-218ENST00000523328 V9GY05 133 aa16.89■□□□□ 0.29
PVT1-218ENST00000523328 KIAA1109Q2LD37 5005 aa16.88■□□□□ 0.29
PVT1-218ENST00000523328 DPPA5A6NC42 116 aa16.88■□□□□ 0.29
PVT1-218ENST00000523328 J3QRK9 145 aa16.88■□□□□ 0.29
PVT1-218ENST00000523328 KBTBD11O94819 623 aa16.88■□□□□ 0.29
PVT1-218ENST00000523328 HIST1H1DP16402 221 aaKnown RBP16.88■□□□□ 0.29
PVT1-218ENST00000523328 OR2B11Q5JQS5 317 aa16.88■□□□□ 0.29
PVT1-218ENST00000523328 HES5Q5TA89 166 aa16.88■□□□□ 0.29
PVT1-218ENST00000523328 PUSL1Q8N0Z8 303 aaKnown RBP16.88■□□□□ 0.29
PVT1-218ENST00000523328 OR1L6Q8NGR2 347 aa16.88■□□□□ 0.29
PVT1-218ENST00000523328 EEF1AKMT3Q96AZ1 226 aa16.88■□□□□ 0.29
PVT1-218ENST00000523328 PRELID3BQ9Y3B1 194 aa16.88■□□□□ 0.29
PVT1-218ENST00000523328 A0A075B6Q4 140 aa16.87■□□□□ 0.29
PVT1-218ENST00000523328 IGLV2-14P01704 120 aa16.87■□□□□ 0.29
PVT1-218ENST00000523328 CTRB1P17538 263 aa16.87■□□□□ 0.29
PVT1-218ENST00000523328 CALRP27797 417 aaKnown RBP16.87■□□□□ 0.29
PVT1-218ENST00000523328 PSMB6P28072 239 aa16.87■□□□□ 0.29
PVT1-218ENST00000523328 APOC4P55056 127 aa16.87■□□□□ 0.29
PVT1-218ENST00000523328 ARFRP1Q13795 201 aa16.87■□□□□ 0.29
PVT1-218ENST00000523328 CTRB2Q6GPI1 263 aa16.87■□□□□ 0.29
PVT1-218ENST00000523328 TMEM167AQ8TBQ9 72 aa16.87■□□□□ 0.29
PVT1-218ENST00000523328 OR2A7Q96R45 310 aa16.87■□□□□ 0.29
PVT1-218ENST00000523328 CENPOQ9BU64 300 aa16.87■□□□□ 0.29
PVT1-218ENST00000523328 MRPS7Q9Y2R9 242 aaKnown RBP16.87■□□□□ 0.29
PVT1-218ENST00000523328 RBMX2Q9Y388 322 aaKnown RBP16.87■□□□□ 0.29
PVT1-218ENST00000523328 MFSD2BA6NFX1 497 aa16.86■□□□□ 0.29
PVT1-218ENST00000523328 GADD45AP24522 165 aa16.86■□□□□ 0.29
PVT1-218ENST00000523328 RANBP1P43487 201 aa16.86■□□□□ 0.29
PVT1-218ENST00000523328 TRAM1Q15629 374 aa16.86■□□□□ 0.29
PVT1-218ENST00000523328 LGALS9CQ6DKI2 356 aa16.86■□□□□ 0.29
PVT1-218ENST00000523328 RBPMS2Q6ZRY4 209 aaKnown RBP16.86■□□□□ 0.29
PVT1-218ENST00000523328 VSTM2AQ8TAG5 236 aa16.86■□□□□ 0.29
PVT1-218ENST00000523328 MARC2Q969Z3 335 aa16.86■□□□□ 0.29
PVT1-218ENST00000523328 HECTD4Q9Y4D8 3996 aa16.86■□□□□ 0.29
PVT1-218ENST00000523328 HLA-DQB1P01920 261 aa16.85■□□□□ 0.29
PVT1-218ENST00000523328 CLEC3BP05452 202 aa16.85■□□□□ 0.29
PVT1-218ENST00000523328 MAS1LP35410 378 aa16.85■□□□□ 0.29
PVT1-218ENST00000523328 BRWD1-AS2P59051 145 aa16.85■□□□□ 0.29
PVT1-218ENST00000523328 ZNF585BQ52M93 769 aa16.85■□□□□ 0.29
PVT1-218ENST00000523328 OR2C3Q8N628 320 aa16.85■□□□□ 0.29
PVT1-218ENST00000523328 RNF183Q96D59 192 aa16.85■□□□□ 0.29
PVT1-218ENST00000523328 MRPL27Q9P0M9 148 aaKnown RBP16.85■□□□□ 0.29
PVT1-218ENST00000523328 OR2W1Q9Y3N9 320 aa16.85■□□□□ 0.29
PVT1-218ENST00000523328 VPS13DQ5THJ4 4388 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 IGLV11-55A0A075B6I3 123 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 TRBV7-1A0A0A6YYK4 115 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 UBE2CO00762 179 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 DHFRP00374 187 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 HSMCR30P0CW71 290 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 HIST1H1BP16401 226 aaKnown RBP16.84■□□□□ 0.29
PVT1-218ENST00000523328 CD36P16671 472 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 GALP22466 123 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 PSMA1P25786 263 aaKnown RBP16.84■□□□□ 0.29
PVT1-218ENST00000523328 PSMD7P51665 324 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 FABP5Q01469 135 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 OR4S2Q8NH73 311 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 UBQLN2Q9UHD9 624 aa16.84■□□□□ 0.29
PVT1-218ENST00000523328 ELF5Q9UKW6 265 aaPredicted RBP16.84■□□□□ 0.29
PVT1-218ENST00000523328 IGKV1D-13A0A0B4J2D9 117 aa16.83■□□□□ 0.28
PVT1-218ENST00000523328 CGB1A6NKQ9 187 aa16.83■□□□□ 0.28
PVT1-218ENST00000523328 REG1AP05451 166 aa16.83■□□□□ 0.28
PVT1-218ENST00000523328 IGKV1-13P0DP09 117 aa16.83■□□□□ 0.28
PVT1-218ENST00000523328 MYOD1P15172 320 aa16.83■□□□□ 0.28
PVT1-218ENST00000523328 NFYAP23511 347 aaPredicted RBP16.83■□□□□ 0.28
PVT1-218ENST00000523328 TALDO1P37837 337 aa16.83■□□□□ 0.28
PVT1-218ENST00000523328 ELLP55199 621 aaPredicted RBP16.83■□□□□ 0.28
PVT1-218ENST00000523328 EIF4EBP1Q13541 118 aaPredicted RBP16.83■□□□□ 0.28
PVT1-218ENST00000523328 SLC38A6Q8IZM9 456 aa16.83■□□□□ 0.28
PVT1-218ENST00000523328 PHLDA1Q8WV24 401 aaPredicted RBP16.83■□□□□ 0.28
PVT1-218ENST00000523328 SPAG8Q99932 426 aaPredicted RBP16.83■□□□□ 0.28
PVT1-218ENST00000523328 C5orf66Q9H5L9 145 aa16.83■□□□□ 0.28
PVT1-218ENST00000523328 KIR2DL5BA0A0G2JN68 375 aa16.82■□□□□ 0.28
PVT1-218ENST00000523328 KIR2DL5BA0A0G2JPC4 375 aa16.82■□□□□ 0.28
PVT1-218ENST00000523328 RAB6AP20340 208 aa16.82■□□□□ 0.28
PVT1-218ENST00000523328 OGFRL1Q5TC84 451 aaPredicted RBP16.82■□□□□ 0.28
PVT1-218ENST00000523328 KIR2DL5AQ8N109 375 aa16.82■□□□□ 0.28
PVT1-218ENST00000523328 KIR2DL5BQ8NHK3 375 aa16.82■□□□□ 0.28
PVT1-218ENST00000523328 ZNF502Q8TBZ5 544 aa16.82■□□□□ 0.28
PVT1-218ENST00000523328 CXorf58Q96LI9 332 aa16.82■□□□□ 0.28
PVT1-218ENST00000523328 IGHV3-35A0A0C4DH35 117 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 ERICH4A6NGS2 130 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 SLC22A5O76082 557 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 DTYMKP23919 212 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 GPR183P32249 361 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 OR10A3P58181 314 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 MLLT11Q13015 90 aaPredicted RBP16.81■□□□□ 0.28
PVT1-218ENST00000523328 ODF3L2Q3SX64 289 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 TMEM217Q8N7C4 229 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 STPG3Q8N7X2 389 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 TCTEX1D2Q8WW35 142 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 HSD17B10Q99714 261 aaKnown RBP16.81■□□□□ 0.28
PVT1-218ENST00000523328 SCN3BQ9NY72 215 aa16.81■□□□□ 0.28
PVT1-218ENST00000523328 SPATA2Q9UM82 520 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms