RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 COMMD3Q9UBI1 195 aa16.49■□□□□ 0.23
HOXA3-206ENST00000522788 ADAM30Q9UKF2 790 aa16.49■□□□□ 0.23
HOXA3-206ENST00000522788 RBFOX2O43251 390 aaKnown RBP eCLIP16.48■□□□□ 0.232e-9■□□□□ 10.6
HOXA3-206ENST00000522788 HRASP01112 189 aa16.48■□□□□ 0.23
HOXA3-206ENST00000522788 RHOGP84095 191 aa16.48■□□□□ 0.23
HOXA3-206ENST00000522788 IL34Q6ZMJ4 242 aa16.48■□□□□ 0.23
HOXA3-206ENST00000522788 SSX9Q7RTT3 188 aa16.48■□□□□ 0.23
HOXA3-206ENST00000522788 HAPLN4Q86UW8 402 aa16.48■□□□□ 0.23
HOXA3-206ENST00000522788 LYSMD2Q8IV50 215 aa16.48■□□□□ 0.23
HOXA3-206ENST00000522788 OR6Q1Q8NGQ2 317 aa16.48■□□□□ 0.23
HOXA3-206ENST00000522788 CMTM3Q96MX0 182 aa16.48■□□□□ 0.23
HOXA3-206ENST00000522788 OR4C12Q96R67 309 aa16.48■□□□□ 0.23
HOXA3-206ENST00000522788 NAA50Q9GZZ1 169 aaKnown RBP16.48■□□□□ 0.23
HOXA3-206ENST00000522788 FAM223BA6NKX1 122 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 APOA1P02647 267 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 PMP2P02689 132 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 ZNF735P0CB33 412 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 GP9P14770 177 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 MYOD1P15172 320 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 PRSS3P35030 304 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 MAS1LP35410 378 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 RPL27AP46776 148 aaKnown RBP16.47■□□□□ 0.23
HOXA3-206ENST00000522788 C19orf35Q6ZS72 473 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 TMEM17Q86X19 198 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 FAM223AQ8IWN6 122 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 GPX8Q8TED1 209 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 MOB3AQ96BX8 217 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 BET1LQ9NYM9 111 aa16.47■□□□□ 0.23
HOXA3-206ENST00000522788 CGB1A6NKQ9 187 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 IGLV1-51P01701 117 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 SYNJ2BPP57105 145 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 CATR1Q13166 79 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 CTF1Q16619 201 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 POU2AF1Q16633 256 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 OR4A47Q6IF82 309 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 ANKRD13BQ86YJ7 626 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 OR9G4Q8NGQ1 327 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 ZNF2Q9BSG1 426 aaPredicted RBP16.46■□□□□ 0.23
HOXA3-206ENST00000522788 ELOVL1Q9BW60 279 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 SLC2A9Q9NRM0 540 aa16.46■□□□□ 0.23
HOXA3-206ENST00000522788 COL7A1Q02388 2944 aa16.46■□□□□ 0.22
HOXA3-206ENST00000522788 NPIPB5A8MRT5 1133 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 GABARAPO95166 117 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 HPRT1P00492 218 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 NHLRC4P0CG21 123 aaPredicted RBP16.45■□□□□ 0.22
HOXA3-206ENST00000522788 TAS2R31P59538 309 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 TAS2R46P59540 309 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 HERV-K104P61576 105 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 RPL8P62917 257 aaKnown RBP16.45■□□□□ 0.22
HOXA3-206ENST00000522788 ATP5G2Q06055 141 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 SLC25A42Q86VD7 318 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 OR5H2Q8NGV7 314 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 OR51H1Q8NH63 302 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 OR4A5Q8NH83 315 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 FYTTD1Q96QD9 318 aaKnown RBP16.45■□□□□ 0.22
HOXA3-206ENST00000522788 FXYD6Q9H0Q3 95 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 ZNF257Q9Y2Q1 563 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 SMAD5-AS1Q9Y6J3 95 aa16.45■□□□□ 0.22
HOXA3-206ENST00000522788 TRAV3A0A0B4J244 114 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 HPGDSO60760 199 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 OR2J3O76001 311 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 CRYGCP07315 174 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 AREGP15514 252 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 HLA-GP17693 338 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 ELK1P19419 428 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 EXOSC2Q13868 293 aaKnown RBP16.44■□□□□ 0.22
HOXA3-206ENST00000522788 KLK9Q2XQG4 91 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 NECAP1Q8NC96 275 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 FANCD2OSQ96PS1 177 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 ASCL2Q99929 193 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 KLK9Q9UKQ9 250 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 DMRT1Q9Y5R6 373 aa16.44■□□□□ 0.22
HOXA3-206ENST00000522788 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.43■□□□□ 0.22
HOXA3-206ENST00000522788 BMPR1BO00238 502 aa16.43■□□□□ 0.22
HOXA3-206ENST00000522788 PGLYRP1O75594 196 aaPredicted RBP16.43■□□□□ 0.22
HOXA3-206ENST00000522788 S1PR2O95136 353 aa16.43■□□□□ 0.22
HOXA3-206ENST00000522788 NQO2P16083 231 aa16.43■□□□□ 0.22
HOXA3-206ENST00000522788 HLA-DMAP28067 261 aa16.43■□□□□ 0.22
HOXA3-206ENST00000522788 HRH1P35367 487 aa16.43■□□□□ 0.22
HOXA3-206ENST00000522788 RORCP51449 518 aa16.43■□□□□ 0.22
HOXA3-206ENST00000522788 AADACL3Q5VUY0 350 aa16.43■□□□□ 0.22
HOXA3-206ENST00000522788 AIFM2Q9BRQ8 373 aa16.43■□□□□ 0.22
HOXA3-206ENST00000522788 RSRP1Q9BUV0 290 aa16.43■□□□□ 0.22
HOXA3-206ENST00000522788 PLEKHA2Q9HB19 425 aa16.43■□□□□ 0.22
HOXA3-206ENST00000522788 UPK2O00526 184 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 CSN3P07498 182 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 CTRB1P17538 263 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 PSMB6P28072 239 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 OR2B8PP59922 312 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 RPEL1Q2QD12 228 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 C15orf32Q32M92 178 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 CTRB2Q6GPI1 263 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 SNX29P2Q8IUI4 249 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 OR6F1Q8NGZ6 308 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 CD300LFQ8TDQ1 290 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 BORCS5Q969J3 196 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 SCPEP1Q9HB40 452 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 HRASLSQ9HDD0 168 aa16.42■□□□□ 0.22
HOXA3-206ENST00000522788 KMT2CQ8NEZ4 4911 aaKnown RBP16.41■□□□□ 0.22
HOXA3-206ENST00000522788 SMIM31A0A1B0GVY4 71 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms