RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 Q6P435 159 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 ETV3LQ6ZN32 361 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 Q71RC1 249 aaPredicted RBP4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 SSX9Q7RTT3 188 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 BATF2Q8N1L9 274 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 ABHD12Q8N2K0 398 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 ZNF383Q8NA42 475 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 OR11H6Q8NGC7 330 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 OR4C13Q8NGP0 309 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 OR8U1Q8NH10 309 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 OR4K15Q8NH41 348 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 MARCH1Q8TCQ1 289 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 DYRK2Q92630 601 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 TOMM40LQ969M1 308 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 GINS3Q9BRX5 216 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 PBDC1Q9BVG4 233 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 NPFFR1Q9GZQ6 430 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 FGF23Q9GZV9 251 aaPredicted RBP4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 SLC35B3Q9H1N7 401 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 PRDM13Q9H4Q3 707 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 BANF2Q9H503 90 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 C5orf66Q9H5L9 145 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 OR2S2Q9NQN1 319 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 SIRT7Q9NRC8 400 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 C19orf12Q9NSK7 152 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 GAR1Q9NY12 217 aaKnown RBP4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 IDI2-AS1Q9NZ38 188 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 DPM3Q9P2X0 92 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 RBM7Q9Y580 266 aaKnown RBP4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 ABCA1O95477 2261 aa4.62□□□□□ -1.67
CTNNA1-220ENST00000520260 MTORP42345 2549 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 A0A087X0M5 115 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 TRBV6-6A0A0A6YYG2 114 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 BORCS7-ASMTA0A0B4J1R7 106 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 IGHV2-26A0A0B4J1V2 119 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 TRAV24A0A0B4J272 114 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 CENPVL3A0A0U1RRI6 287 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 A0A1B0GX30 115 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 UMAD1C9J7I0 102 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 K7EPK0 472 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 KCNAB3O43448 404 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 PSPNO60542 156 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 DEDDO75618 318 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 ADAP1O75689 374 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 OR2C1O95371 312 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 MMP9P14780 707 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 HIST1H1DP16402 221 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 HOXB4P17483 251 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 COX7A1P24310 79 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 CHATP28329 748 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 RPL12P30050 165 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 FCGR2CP31995 323 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 SAA4P35542 130 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 TAS2R46P59540 309 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 SUPT4H1P63272 117 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 PAX2Q02962 417 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 KRTAP1-1Q07627 177 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 UNC119Q13432 240 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 ANKRD55Q3KP44 614 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 FAM71F2Q6NXP2 309 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 PNKDQ8N490 385 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 PRR18Q8N4B5 295 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 FAM89BQ8N5H3 189 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 FAM71E2Q8N5Q1 922 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 FAM24BQ8N5W8 94 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 GVQW1Q8N7I0 195 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 OR4F5Q8NH21 305 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 OR10J5Q8NHC4 309 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 MRGPRDQ8TDS7 321 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 IL1F10Q8WWZ1 152 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 OR10C1Q96KK4 312 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 RTBDNQ9BSG5 229 aaPredicted RBP4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 RSRP1Q9BUV0 290 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 KRTAP4-5Q9BYR2 181 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 LINC00574Q9H8X3 128 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 C1RLQ9NZP8 487 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 FBXL17Q9UF56 701 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 VPREB3Q9UKI3 123 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 CHD3Q12873 2000 aaKnown RBP4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 TLN2Q9Y4G6 2542 aa4.61□□□□□ -1.67
CTNNA1-220ENST00000520260 NSD1Q96L73 2696 aaPredicted RBP4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 CSPG4Q6UVK1 2322 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 CSMD1Q96PZ7 3565 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 ACANP16112 2415 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 A0A1B0GV90 55 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 RNF212BA8MTL3 300 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 TRDCB7Z8K6 153 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 E5RGE8 158 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 TSTD3H0UI37 97 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 ITGB1BP1O14713 200 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 RAB29O14966 203 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 AGPAT2O15120 278 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 GPR137BO60478 399 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 FSHBP01225 129 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 APOA2P02652 100 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 PMP2P02689 132 aa4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 RNASE1P07998 156 aaKnown RBP4.6□□□□□ -1.67
CTNNA1-220ENST00000520260 CCL3L1P16619 93 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms