RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 VCX3AQ9NNX9 186 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 ABCB10Q9NRK6 738 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 TXNL4BQ9NX01 149 aaKnown RBP5.39□□□□□ -1.55
SDCBP-208ENST00000520228 GPR132Q9UNW8 380 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 HILPDAQ9Y5L2 63 aa5.39□□□□□ -1.55
SDCBP-208ENST00000520228 A0A1B0GUS0 222 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 C12orf77C9JDV5 145 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 E5RGE8 158 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 C15orf65H3BRN8 121 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 BUB1B-PAK6H3BSN5 160 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 SDCBPO00560 298 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-208ENST00000520228 SOCS1O15524 211 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 NDUFA7O95182 113 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 IGLV1-47P01700 117 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 CD36P16671 472 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 RCC1P18754 421 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-208ENST00000520228 DYNLT3P51808 116 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 ARHGDIBP52566 201 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 HLA-DRB5Q30154 266 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 FAM106AQ4KMX7 169 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 UTF1Q5T230 341 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 TPTE2P1Q5T6R2 138 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 C6orf201Q7Z4U5 140 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 TPRA1Q86W33 373 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 GAPTQ8N292 157 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 OR52M1Q8NGK5 317 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 UBALD1Q8TB05 177 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 PIFOQ8TCI5 191 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 LEAP2Q969E1 77 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 KCTD7Q96MP8 289 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 SULT4A1Q9BR01 284 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 NICN1Q9BSH3 213 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 LPAR5Q9H1C0 372 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 OR51E2Q9H255 320 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 RAB18Q9NP72 206 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 PLEKHJ1Q9NW61 149 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 KCNIP1Q9NZI2 227 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 RAB22AQ9UL26 194 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 PSG11Q9UQ72 335 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 NSG2Q9Y328 171 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 AMMECR1Q9Y4X0 333 aaPredicted RBP5.38□□□□□ -1.55
SDCBP-208ENST00000520228 MMP24Q9Y5R2 645 aa5.38□□□□□ -1.55
SDCBP-208ENST00000520228 A0A0A6YYD4 124 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 LOC100506127A0A0U1RQW1 187 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 CLPSL1A2RUU4 121 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 SMIM30A4D0T7 59 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 A4D1N5 150 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 OOSP1A8MZH6 123 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 LY6LH3BQJ8 138 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 HBZP02008 142 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 MDKP21741 143 aaPredicted RBP5.37□□□□□ -1.55
SDCBP-208ENST00000520228 GADD45AP24522 165 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 BRS3P32247 399 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 SDC2P34741 201 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 NPBWR1P48145 328 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 GNG10P50151 68 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 MADCAM1Q13477 382 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 OR56B1Q8NGI3 324 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 OR10X1Q8NGY0 326 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 OR1L1Q8NH94 360 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 C11orf45Q8TAV5 145 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 MRPL30Q8TCC3 161 aaKnown RBP5.37□□□□□ -1.55
SDCBP-208ENST00000520228 RPEQ96AT9 228 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 CYYR1Q96J86 154 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 TAF9BQ9HBM6 251 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 GNG12Q9UBI6 72 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 PITPNC1Q9UKF7 332 aa5.37□□□□□ -1.55
SDCBP-208ENST00000520228 IGHV3-43A0A0B4J1X8 118 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 A0A1W2PPE3 182 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 METTL21EPA6NDL7 271 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 A6NDX4 124 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 EPM2AB3EWF7 344 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 SOCS3O14543 225 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 CTDSPLO15194 276 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 CHST1O43916 411 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 NAPSAO96009 420 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 IGHV3-43DP0DP04 118 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 CD24P25063 80 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 EFNB2P52799 333 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 TMEM50BP56557 158 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 MOGAT2Q3SYC2 334 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 TIMM50Q3ZCQ8 353 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 Q3ZCU0 254 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 LCE1FQ5T754 118 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 OLFML2AQ68BL7 652 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 CCBE1Q6UXH8 406 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-208ENST00000520228 C8orf31Q8N9H6 132 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 OR4C13Q8NGP0 309 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 LINC01006Q8NI28 216 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 TOMM40LQ969M1 308 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 PTX4Q96A99 478 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 GALMQ96C23 342 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 RAB3CQ96E17 227 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 ARHGAP5-AS1Q96IT6 56 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 C16orf95Q9H693 158 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 RNF167Q9H6Y7 350 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 C12orf4Q9NQ89 552 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 OR2S2Q9NQN1 319 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 ABRACLQ9P1F3 81 aa5.36□□□□□ -1.55
SDCBP-208ENST00000520228 AK3Q9UIJ7 227 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 233.9 ms