RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 RAB1BQ9H0U4 201 aa1.02□□□□□ -2.25
SKP1-205ENST00000519054 FBXL12Q9NXK8 326 aa1.02□□□□□ -2.25
SKP1-205ENST00000519054 C14orf166Q9Y224 244 aaKnown RBP1.02□□□□□ -2.25
SKP1-205ENST00000519054 RBFOX3A6NFN3 312 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 CD300LBA8K4G0 201 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 C10orf142B7Z368 130 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 E7EWF7 191 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 UPK2O00526 184 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 CDIPTO14735 213 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 SH2D1AO60880 128 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 BRI3O95415 125 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 GPR75O95800 540 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 IVLP07476 585 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 CECR9P0C854 216 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 CCL2P13500 99 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 CNTFRP26992 372 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 PSMB9P28065 219 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 ARR3P36575 388 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 PRDX4Q13162 271 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 WDR43Q15061 677 aaKnown RBP eCLIP1.01□□□□□ -2.25
SKP1-205ENST00000519054 SDHAF4Q5VUM1 108 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 NIPAL1Q6NVV3 410 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 ERICH5Q6P6B1 374 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 ZNF767PQ75MW2 155 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 GALNT10Q86SR1 603 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 CDRT4Q8N9R6 151 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 OR2Y1Q8NGV0 311 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 OR6K2Q8NGY2 324 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 OR51Q1Q8NH59 317 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 TWIST2Q8WVJ9 160 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 OR5P2Q8WZ92 322 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 TSSK6Q9BXA6 273 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 AICDAQ9GZX7 198 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 NXF2Q9GZY0 626 aaKnown RBP1.01□□□□□ -2.25
SKP1-205ENST00000519054 PLEKHA1Q9HB21 404 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 SDHAF2Q9NX18 166 aa1.01□□□□□ -2.25
SKP1-205ENST00000519054 NXT1Q9UKK6 140 aaKnown RBP1.01□□□□□ -2.25
SKP1-205ENST00000519054 PCYT1BQ9Y5K3 369 aaPredicted RBP1.01□□□□□ -2.25
SKP1-205ENST00000519054 C19orf71A6NCJ1 209 aa1□□□□□ -2.25
SKP1-205ENST00000519054 MGAT4DA6NG13 374 aa1□□□□□ -2.25
SKP1-205ENST00000519054 OR5H14A6NHG9 310 aa1□□□□□ -2.25
SKP1-205ENST00000519054 ZNF860A6NHJ4 632 aa1□□□□□ -2.25
SKP1-205ENST00000519054 NDUFS8O00217 210 aa1□□□□□ -2.25
SKP1-205ENST00000519054 MYO1DO94832 1006 aa1□□□□□ -2.25
SKP1-205ENST00000519054 OR12D1P0DN82 309 aa1□□□□□ -2.25
SKP1-205ENST00000519054 HMGA1P17096 107 aaKnown RBP1□□□□□ -2.25
SKP1-205ENST00000519054 IL12BP29460 328 aa1□□□□□ -2.25
SKP1-205ENST00000519054 BLVRBP30043 206 aaPredicted RBP1□□□□□ -2.25
SKP1-205ENST00000519054 LCN1P31025 176 aa1□□□□□ -2.25
SKP1-205ENST00000519054 MAGEA6P43360 314 aa1□□□□□ -2.25
SKP1-205ENST00000519054 GCLMP48507 274 aa1□□□□□ -2.25
SKP1-205ENST00000519054 BAXQ07812 192 aa1□□□□□ -2.25
SKP1-205ENST00000519054 BNIP2Q12982 314 aa1□□□□□ -2.25
SKP1-205ENST00000519054 ZNHIT3Q15649 155 aaPredicted RBP1□□□□□ -2.25
SKP1-205ENST00000519054 SPIN4Q56A73 249 aa1□□□□□ -2.25
SKP1-205ENST00000519054 RESP18Q5W5W9 173 aa1□□□□□ -2.25
SKP1-205ENST00000519054 LAIR2Q6ISS4 152 aa1□□□□□ -2.25
SKP1-205ENST00000519054 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
SKP1-205ENST00000519054 PDCL2Q8N4E4 241 aa1□□□□□ -2.25
SKP1-205ENST00000519054 ZIC4Q8N9L1 334 aa1□□□□□ -2.25
SKP1-205ENST00000519054 OR2AE1Q8NHA4 323 aa1□□□□□ -2.25
SKP1-205ENST00000519054 CLHC1Q8NHS4 586 aa1□□□□□ -2.25
SKP1-205ENST00000519054 DOK4Q8TEW6 326 aa1□□□□□ -2.25
SKP1-205ENST00000519054 BLNKQ8WV28 456 aa1□□□□□ -2.25
SKP1-205ENST00000519054 TMIGD2Q96BF3 282 aa1□□□□□ -2.25
SKP1-205ENST00000519054 ISOC1Q96CN7 298 aa1□□□□□ -2.25
SKP1-205ENST00000519054 VAT1Q99536 393 aa1□□□□□ -2.25
SKP1-205ENST00000519054 PRRG3Q9BZD7 231 aa1□□□□□ -2.25
SKP1-205ENST00000519054 WDR55Q9H6Y2 383 aaPredicted RBP1□□□□□ -2.25
SKP1-205ENST00000519054 MAT2BQ9NZL9 334 aa1□□□□□ -2.25
SKP1-205ENST00000519054 SLC22A14Q9Y267 594 aa1□□□□□ -2.25
SKP1-205ENST00000519054 POFUT2Q9Y2G5 429 aa1□□□□□ -2.25
SKP1-205ENST00000519054 NYNRINQ9P2P1 1898 aaKnown RBP1□□□□□ -2.25
SKP1-205ENST00000519054 CITO14578 2027 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 A0A1B0GTI1 187 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 KNCNA6PVL3 124 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 C21orf140B9A014 251 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 hCG_2039718K7EN88 272 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 CA2P00918 260 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 SMR3BP02814 79 aaPredicted RBP0.99□□□□□ -2.25
SKP1-205ENST00000519054 GUSBP08236 651 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 PRTN3P24158 256 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 TSPOP30536 169 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 GTF2H1P32780 548 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 DEKP35659 375 aaKnown RBP0.99□□□□□ -2.25
SKP1-205ENST00000519054 DNASE1L1P49184 302 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 XKP51811 444 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 PLTPP55058 493 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 RAB38P57729 211 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 HES1Q14469 280 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 PSG3Q16557 428 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 ACTBL2Q562R1 376 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 ACSBG2Q5FVE4 666 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 CYP4Z1Q86W10 505 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 SLC13A5Q86YT5 568 aaPredicted RBP0.99□□□□□ -2.25
SKP1-205ENST00000519054 DRAXINQ8NBI3 349 aaPredicted RBP0.99□□□□□ -2.25
SKP1-205ENST00000519054 GPR119Q8TDV5 335 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 RNASE6Q93091 150 aaKnown RBP0.99□□□□□ -2.25
SKP1-205ENST00000519054 TAS2R9Q9NYW1 312 aa0.99□□□□□ -2.25
SKP1-205ENST00000519054 SLC23A2Q9UGH3 650 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms