RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 TSPAN9O75954 239 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 SNAPC5O75971 98 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 ACTL6BO94805 426 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 KBTBD11O94819 623 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 KRASP01116 189 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 SAA1P0DJI8 122 aaPredicted RBP7.54□□□□□ -1.2
CLN8-203ENST00000518780 SLC25A6P12236 298 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 AKR1C2P52895 323 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 PLGLAQ15195 96 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 PRSS8Q16651 343 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 TMEM268Q5VZI3 342 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 THOC7Q6I9Y2 204 aaKnown RBP7.54□□□□□ -1.2
CLN8-203ENST00000518780 OR4A47Q6IF82 309 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 H2BFWTQ7Z2G1 175 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 TMEM219Q86XT9 240 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 SELENOHQ8IZQ5 122 aaKnown RBP7.54□□□□□ -1.2
CLN8-203ENST00000518780 Q8N2B8 174 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 COA4Q9NYJ1 87 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 ZNF580Q9UK33 172 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 PRNDQ9UKY0 176 aa7.54□□□□□ -1.2
CLN8-203ENST00000518780 A0A1B0GU03 582 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 A0A1B0GUS0 222 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 FAM181BA6NEQ2 426 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 UPK2O00526 184 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 CHST1O43916 411 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 NDUFA7O95182 113 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 IFNA21P01568 189 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 IGKV1-39P01597 117 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 IGHG2P01859 326 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 IGKV1D-39P04432 117 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 AMY1AP04745 511 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 P0C879 139 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 G6PCP35575 357 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 RPL8P62917 257 aaKnown RBP7.53□□□□□ -1.2
CLN8-203ENST00000518780 TMEM95Q3KNT9 176 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 ANKRD55Q3KP44 614 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 ZNF429Q86V71 674 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 FOXRED2Q8IWF2 684 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 C12orf45Q8N5I9 185 aaPredicted RBP7.53□□□□□ -1.2
CLN8-203ENST00000518780 OR5B3Q8NH48 314 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 RNASE11Q8TAA1 199 aaKnown RBP7.53□□□□□ -1.2
CLN8-203ENST00000518780 CASTOR1Q8WTX7 329 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 TMEM68Q96MH6 324 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 SRSF8Q9BRL6 282 aaKnown RBP7.53□□□□□ -1.2
CLN8-203ENST00000518780 GON7Q9BXV9 100 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 FBXL15Q9H469 300 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 C16orf95Q9H693 158 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 TNFRSF19Q9NS68 423 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 TMEM140Q9NV12 185 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 ZNF257Q9Y2Q1 563 aa7.53□□□□□ -1.2
CLN8-203ENST00000518780 ANK3Q12955 4377 aaKnown RBP7.53□□□□□ -1.2
CLN8-203ENST00000518780 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 DBX1A6NMT0 343 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 IGKV1-5P01602 117 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 HLA-GP17693 338 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 ATF4P18848 351 aaPredicted RBP7.52□□□□□ -1.21
CLN8-203ENST00000518780 CNTFRP26992 372 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 CX3CL1P78423 397 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 TMEM267Q0VDI3 215 aaPredicted RBP7.52□□□□□ -1.21
CLN8-203ENST00000518780 TATDN3Q17R31 274 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 AARDQ4LEZ3 155 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 NMSQ5H8A3 153 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 SSX9Q7RTT3 188 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 HSD17B13Q7Z5P4 300 aaPredicted RBP7.52□□□□□ -1.21
CLN8-203ENST00000518780 LURAP1LQ8IV03 231 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 MRPL41Q8IXM3 137 aaKnown RBP7.52□□□□□ -1.21
CLN8-203ENST00000518780 SLC35G3Q8N808 338 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 OR4A16Q8NH70 328 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 OR2T6Q8NHC8 308 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 LHFPL5Q8TAF8 219 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 DUX5Q96PT3 197 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 SPIN2AQ99865 258 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 SPIN2BQ9BPZ2 258 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 COMMD5Q9GZQ3 224 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 BEX1Q9HBH7 125 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.52□□□□□ -1.21
CLN8-203ENST00000518780 JMJD1CQ15652 2540 aa7.52□□□□□ -1.21
CLN8-203ENST00000518780 SETD2Q9BYW2 2564 aaPredicted RBP7.52□□□□□ -1.21
CLN8-203ENST00000518780 IGHV7-81A0A0B4J1V7 117 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 C15orf61A6NNL5 157 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 AP4M1O00189 453 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 CNIH1O95406 144 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 LY86O95711 162 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 IGF1P05019 195 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 SULT1A3P0DMM9 295 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 SULT1A4P0DMN0 295 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 SPNP16150 400 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 COMPP49747 757 aaPredicted RBP7.51□□□□□ -1.21
CLN8-203ENST00000518780 CRIP2P52943 208 aaPredicted RBP7.51□□□□□ -1.21
CLN8-203ENST00000518780 BLCAPP62952 87 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 RELBQ01201 579 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 FBLN7Q53RD9 439 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 LYZL2Q7Z4W2 148 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 SLC35E3Q7Z769 313 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 VKORC1L1Q8N0U8 176 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 OR1L8Q8NGR8 309 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 OR4F5Q8NH21 305 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 OR52E5Q8NH55 327 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 SEC22CQ9BRL7 303 aa7.51□□□□□ -1.21
CLN8-203ENST00000518780 OR51J1Q9H342 316 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms