RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 ZNF562Q6V9R5 426 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 Q6ZSV7 163 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 LYG2Q86SG7 212 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 FAM219AQ8IW50 185 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 VKORC1L1Q8N0U8 176 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 Q8N6K4 173 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SLC35G3Q8N808 338 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 C3orf56Q8N813 242 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 Q8N9W7 124 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OR4X2Q8NGF9 303 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OR1S1Q8NH92 325 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 GRPEL2Q8TAA5 225 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CHPT1Q8WUD6 406 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ARPC1AQ92747 370 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 IL22RA2Q969J5 263 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 MRGPRFQ96AM1 343 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 C5orf30Q96GV9 206 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TMEM56Q96MV1 263 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TP53RKQ96S44 253 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 C19orf24Q9BVV8 132 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OR51J1Q9H342 316 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TMEM140Q9NV12 185 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 BET1LQ9NYM9 111 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TBC1D24Q9ULP9 559 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 FLVCR2Q9UPI3 526 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SIGLEC9Q9Y336 463 aa4.34□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TRAV41A0A0B4J266 112 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 A0A0B4J2A0 478 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 C13orf42A0A1B0GVH6 325 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 A0A1W2PN81 502 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 DUXBA0A1W2PPF3 345 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 C9orf170A2RU37 121 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PSMB11A5LHX3 300 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 C5orf51A6NDU8 294 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 MSGN1A6NI15 193 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SH2D7A6NKC9 451 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CEBPZOSA8MTT3 80 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 FAM25EA8MYX2 175 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 WRBO00258 174 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 UPK2O00526 184 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 DUS4LO95620 317 aaKnown RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CDS2O95674 445 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 FGF2P09038 288 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HOXB5P09067 269 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TRAPPC2P0DI81 140 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TRAPPC2BP0DI82 140 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SULT1A3P0DMM9 295 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SULT1A4P0DMN0 295 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HLA-GP17693 338 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CHRNA7P36544 502 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SNCAP37840 140 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SUB1P53999 127 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 CX3CL1P78423 397 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ERHP84090 104 aaKnown RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 EIF4EBP1Q13541 118 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PRSS8Q16651 343 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ECSCRQ19T08 205 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TUSC1Q2TAM9 212 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 KHDC1LQ5JSQ8 128 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 UNQ5815/PRO19632Q6UWF5 114 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 HSD17B13Q7Z5P4 300 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NRARPQ7Z6K4 114 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SELENOHQ8IZQ5 122 aaKnown RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 C12orf45Q8N5I9 185 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 FAM71E2Q8N5Q1 922 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 COMMD1Q8N668 190 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR1L8Q8NGR8 309 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TMEM167AQ8TBQ9 72 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ZNF431Q8TF32 576 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 GALNT14Q96FL9 552 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 RITA1Q96K30 269 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TMEM68Q96MH6 324 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ALX4Q9H161 411 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 C16orf95Q9H693 158 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ZNF430Q9H8G1 570 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PLSCR3Q9NRY6 295 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SHPKQ9UHJ6 478 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TMED3Q9Y3Q3 217 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OR51B2Q9Y5P1 312 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 MMP24Q9Y5R2 645 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 MXRA5Q9NR99 2828 aa4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SETD2Q9BYW2 2564 aaPredicted RBP4.33□□□□□ -1.72
SCARNA16.4-201ENST00000516956 IGHV7-81A0A0B4J1V7 117 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TCRBV4S1A1TA0A5B7 111 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 TMEM89A2RUT3 159 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 SRRM4A7MD48 611 aaKnown RBP4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 NUDT19A8MXV4 375 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 FCN1O00602 326 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 ATP6V0E1O15342 81 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 MED6O75586 246 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 IGLV2-23P01705 113 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 IGHG2P01859 326 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OPN1MWP04001 364 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 IL5P05113 134 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OPN1MW2P0DN77 364 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 OPN1MW3P0DN78 364 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 PF4V1P10720 104 aa4.32□□□□□ -1.72
SCARNA16.4-201ENST00000516956 MDKP21741 143 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms