RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 TCTEX1D1Q8N7M0 179 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 SAP30LQ9HAJ7 183 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 NAPSAO96009 420 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 HPRT1P00492 218 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 TMEM42Q69YG0 159 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 SLC17A3O00476 420 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 RAB29O14966 203 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 SLC31A2O15432 143 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 S100A4P26447 101 aaKnown RBP8.63□□□□□ -1.03
SMG7-215ENST00000515829 NTF4P34130 210 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 NPVFQ9HCQ7 196 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 WIPI2Q9Y4P8 454 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 APELAP0DMC3 54 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 Q6ZN92 141 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 TCF23Q7RTU1 214 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 TMEM45BQ96B21 275 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 FOXJ2Q9P0K8 574 aa8.63□□□□□ -1.03
SMG7-215ENST00000515829 NUP210Q8TEM1 1887 aaPredicted RBP8.63□□□□□ -1.03
SMG7-215ENST00000515829 IGKV1-5P01602 117 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 RPP25LQ8N5L8 163 aaKnown RBP8.62□□□□□ -1.03
SMG7-215ENST00000515829 STXBP6Q8NFX7 210 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 K7ESF4 209 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 ORM2P19652 201 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 REG1BP48304 166 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 SPCS3P61009 180 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 RPL39P5Q59GN2 51 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 LINC00470Q9BZP3 86 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 IGKV1-6A0A0C4DH72 117 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 C16orf97H3BN30 126 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 C1QTNF9P0C862 333 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 WNT5AP41221 380 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
SMG7-215ENST00000515829 PRDM6Q9NQX0 595 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 SEMA5BQ9P283 1151 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 J3QR06 171 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 OR4A8P0C604 315 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 USF1P22415 310 aaPredicted RBP8.62□□□□□ -1.03
SMG7-215ENST00000515829 SFRP2Q96HF1 295 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 KLF2Q9Y5W3 355 aaPredicted RBP8.62□□□□□ -1.03
SMG7-215ENST00000515829 HTTP42858 3142 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 A0A1B0GW64 132 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 LHX2P50458 406 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 LINC00205P59089 165 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 C21orf62-AS1Q17RA5 79 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 KRTCAP3Q53RY4 240 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 OR13A1Q8NGR1 328 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 TMEM140Q9NV12 185 aa8.62□□□□□ -1.03
SMG7-215ENST00000515829 ETV2O00321 342 aaPredicted RBP8.61□□□□□ -1.03
SMG7-215ENST00000515829 TMPRSS2O15393 492 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 GPX4P36969 197 aaPredicted RBP8.61□□□□□ -1.03
SMG7-215ENST00000515829 CLDN18P56856 261 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 STARD4Q96DR4 205 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 NEURL1O76050 574 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 PSG7Q13046 419 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 PQLC2Q6ZP29 291 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 SSX7Q7RTT5 188 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 TGIF2LYQ8IUE0 185 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 THADAQ6YHU6 1953 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 SH2D7A6NKC9 451 aaPredicted RBP8.61□□□□□ -1.03
SMG7-215ENST00000515829 DIRC3C9JPN6 131 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 IGHV2-5P01817 119 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 COX7A1P24310 79 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 Q0VFX4 171 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 VAMP3Q15836 100 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 DTX1Q86Y01 620 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 ZNRF1Q8ND25 227 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 LAMA2P24043 3122 aaKnown RBP8.61□□□□□ -1.03
SMG7-215ENST00000515829 C5orf42Q9H799 3197 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 AHRRA9YTQ3 701 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 CDX4O14627 284 aaPredicted RBP8.61□□□□□ -1.03
SMG7-215ENST00000515829 GOSR1O95249 250 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 AMBPP02760 352 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 CRYBB3P26998 211 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 FAM90A2PQ658T7 463 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 FAM214BQ7L5A3 538 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 MBD3L1Q8WWY6 194 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 GOLT1BQ9Y3E0 138 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 OR51B2Q9Y5P1 312 aa8.61□□□□□ -1.03
SMG7-215ENST00000515829 SCO2A0A1W2PP80 73 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 J3QR89 54 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 RPLP1P05386 114 aaKnown RBP8.6□□□□□ -1.03
SMG7-215ENST00000515829 MPV17P39210 176 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 PDPNQ86YL7 162 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 IFNL4K9M1U5 179 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 SMPD2O60906 423 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 IGHV3-48P01763 117 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 B3GALT5-AS1P59052 145 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 RPL31P62899 125 aaKnown RBP8.6□□□□□ -1.03
SMG7-215ENST00000515829 TNXAQ16473 311 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 OPN3Q9H1Y3 402 aaPredicted RBP8.6□□□□□ -1.03
SMG7-215ENST00000515829 PCDH15Q96QU1 1955 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 FOXI3A8MTJ6 420 aaPredicted RBP8.6□□□□□ -1.03
SMG7-215ENST00000515829 PLAUP00749 431 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 LGALS7P47929 136 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 C1orf185Q5T7R7 199 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 ASCL4Q6XD76 172 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 FOXL2NBQ6ZUU3 175 aa8.6□□□□□ -1.03
SMG7-215ENST00000515829 FLYWCH2Q96CP2 140 aaKnown RBP8.6□□□□□ -1.03
SMG7-215ENST00000515829 CRIM1Q9NZV1 1036 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms