RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 TMEM213A2RRL7 107 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 COX7A2LO14548 114 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 APOMO95445 188 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 MSMBP08118 114 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 CLDN12P56749 244 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 FAM27BQ5VT28 67 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 DNM1P34Q6PK57 102 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 UBL4BQ8N7F7 174 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 GNPNAT1Q96EK6 184 aaPredicted RBP0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 REG4Q9BYZ8 158 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 MS4A6AQ9H2W1 248 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 ZFHX2Q9C0A1 2572 aaPredicted RBP0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 RTTNQ86VV8 2226 aa0.83□□□□□ -2.28
SMARCA5-203ENST00000515531 GEMIN2O14893 280 aaKnown RBP0.82□□□□□ -2.28
SMARCA5-203ENST00000515531 NDUFA5Q16718 116 aa0.82□□□□□ -2.28
SMARCA5-203ENST00000515531 SDHAF4Q5VUM1 108 aa0.82□□□□□ -2.28
SMARCA5-203ENST00000515531 OR8B3Q8NGG8 313 aa0.82□□□□□ -2.28
SMARCA5-203ENST00000515531 HRASLSQ9HDD0 168 aa0.82□□□□□ -2.28
SMARCA5-203ENST00000515531 SPANXB1Q9NS25 103 aaPredicted RBP0.82□□□□□ -2.28
SMARCA5-203ENST00000515531 EURLQ9NYK6 297 aa0.82□□□□□ -2.28
SMARCA5-203ENST00000515531 PRELID1Q9Y255 219 aa0.82□□□□□ -2.28
SMARCA5-203ENST00000515531 FBN2P35556 2912 aa0.82□□□□□ -2.28
SMARCA5-203ENST00000515531 TRPC5OSA6NMA1 111 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 IBA57-AS1B1ANH7 110 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 SDCBPO00560 298 aaPredicted RBP0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 HIST1H1CP16403 213 aaKnown RBP0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 DDTP30046 118 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 CDK10Q15131 360 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 TBC1D19Q8N5T2 526 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 ZNF676Q8N7Q3 588 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 C9orf163Q8N9P6 203 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 HAVCR2Q8TDQ0 301 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 PACRGQ96M98 296 aaPredicted RBP0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 DCUN1D5Q9BTE7 237 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 TIMM22Q9Y584 194 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 GLI3P10071 1580 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 SETD5Q9C0A6 1442 aa0.81□□□□□ -2.28
SMARCA5-203ENST00000515531 NOTCH1P46531 2555 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 ERICH2A1L162 156 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 UBBP0CG47 229 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 CXCR4P61073 352 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 C10orf55Q5SWW7 151 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 CD302Q8IX05 232 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 SLC22A24Q8N4F4 322 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 OR2T27Q8NH04 317 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 NDEL1Q9GZM8 345 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 DERL2Q9GZP9 239 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 SPACA1Q9HBV2 294 aa0.8□□□□□ -2.28
SMARCA5-203ENST00000515531 GOLGA6L10A6NI86 522 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 HPGDSO60760 199 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 NSA2O95478 260 aaKnown RBP0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 CCL5P13501 91 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 CSN1S1P47710 185 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 SBSNQ6UWP8 590 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 SSX8Q7RTT4 187 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 FAM19A5Q7Z5A7 132 aaPredicted RBP0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 C12orf29Q8N999 325 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 SERPINI1Q99574 410 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 DHRS9Q9BPW9 319 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 MRPL57Q9BQC6 102 aaKnown RBP0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 CHMP4BQ9H444 224 aaKnown RBP0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 GPR84Q9NQS5 396 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 GMEB1Q9Y692 573 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 MICAL3Q7RTP6 2002 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 FREM1Q5H8C1 2179 aa0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 EIF4G1Q04637 1599 aaKnown RBP0.79□□□□□ -2.28
SMARCA5-203ENST00000515531 TRBV10-2A0A0K0K1G8 114 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 TINCRA0A1B0GVN0 87 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 TRAPPC2LH3BP13 241 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 ITGB1BP1O14713 200 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 LEPROTO15243 131 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 RAB13P51153 203 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 C5orf46Q6UWT4 87 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 DHFR2Q86XF0 187 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 EEF1AKMT1Q8WVE0 214 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 BBS2Q9BXC9 721 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 CXorf21Q9HAI6 301 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 ANAPC10Q9UM13 185 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 LHFPL6Q9Y693 200 aa0.78□□□□□ -2.28
SMARCA5-203ENST00000515531 GREB1Q4ZG55 1949 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 IQCF5A8MTL0 148 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 HSBP1L1C9JCN9 74 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 SLC22A1O15245 554 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 NDUFS6O75380 124 aaKnown RBP0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 CDC34P49427 236 aaPredicted RBP0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 FAM78BQ5VT40 261 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 GID4Q8IVV7 300 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 FAM19A2Q8N3H0 131 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 ZNF565Q8N9K5 539 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 OR7G1Q8NGA0 311 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 JOSD2Q8TAC2 188 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 ERMAPQ96PL5 475 aaPredicted RBP0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 YIPF3Q9GZM5 350 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 TRABDQ9H4I3 376 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 FKBP14Q9NWM8 211 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 KIF24Q5T7B8 1368 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 TONSLQ96HA7 1378 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 HEATR5BQ9P2D3 2071 aa0.77□□□□□ -2.29
SMARCA5-203ENST00000515531 TRAV14DV4A0A0A6YYC5 116 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms