RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 ERVK-16P61578 105 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 SSBP2P81877 361 aaPredicted RBP16.55■□□□□ 0.24
NEIL3-202ENST00000513321 TMED4Q7Z7H5 227 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 SGPP2Q8IWX5 399 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 MMD2Q8IY49 270 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 OR5AU1Q8NGC0 362 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 ABHD5Q8WTS1 349 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 BET1LQ9NYM9 111 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 FBXO7Q9Y3I1 522 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 WSB1Q9Y6I7 421 aa16.55■□□□□ 0.24
NEIL3-202ENST00000513321 PLXNB1O43157 2135 aa16.54■□□□□ 0.24
NEIL3-202ENST00000513321 MARCH11A6NNE9 402 aa16.54■□□□□ 0.24
NEIL3-202ENST00000513321 B3GALNT1O75752 331 aa16.54■□□□□ 0.24
NEIL3-202ENST00000513321 OR5AC1P0C628 307 aa16.54■□□□□ 0.24
NEIL3-202ENST00000513321 EGR2P11161 476 aaPredicted RBP16.54■□□□□ 0.24
NEIL3-202ENST00000513321 IFITM3Q01628 133 aa16.54■□□□□ 0.24
NEIL3-202ENST00000513321 C10orf99Q6UWK7 81 aa16.54■□□□□ 0.24
NEIL3-202ENST00000513321 ZNF329Q86UD4 541 aa16.54■□□□□ 0.24
NEIL3-202ENST00000513321 ARPC1AQ92747 370 aa16.54■□□□□ 0.24
NEIL3-202ENST00000513321 FAM103A1Q9BTL3 118 aaKnown RBP16.54■□□□□ 0.24
NEIL3-202ENST00000513321 TMEM140Q9NV12 185 aa16.54■□□□□ 0.24
NEIL3-202ENST00000513321 KCNIP3Q9Y2W7 256 aa16.54■□□□□ 0.24
NEIL3-202ENST00000513321 PSMB11A5LHX3 300 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 CREBL2O60519 120 aaPredicted RBP16.53■□□□□ 0.24
NEIL3-202ENST00000513321 ACTL6BO94805 426 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 IL6RP08887 468 aaPredicted RBP16.53■□□□□ 0.24
NEIL3-202ENST00000513321 UCP1P25874 307 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 TNXAQ16473 311 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 TRIM16LQ309B1 348 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 C11orf44Q8N8P7 122 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 OR4A5Q8NH83 315 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 GRPEL2Q8TAA5 225 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 GLYATL2Q8WU03 294 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 GON7Q9BXV9 100 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 TMEM222Q9H0R3 208 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 ZNF580Q9UK33 172 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 TBC1D24Q9ULP9 559 aa16.53■□□□□ 0.24
NEIL3-202ENST00000513321 TRAV3A0A0B4J244 114 aa16.52■□□□□ 0.24
NEIL3-202ENST00000513321 G3V318 75 aa16.52■□□□□ 0.24
NEIL3-202ENST00000513321 UPK2O00526 184 aa16.52■□□□□ 0.24
NEIL3-202ENST00000513321 VDAC1P21796 283 aa16.52■□□□□ 0.24
NEIL3-202ENST00000513321 SHISA2Q6UWI4 295 aa16.52■□□□□ 0.24
NEIL3-202ENST00000513321 SGMS2Q8NHU3 365 aa16.52■□□□□ 0.24
NEIL3-202ENST00000513321 SEC22AQ96IW7 307 aa16.52■□□□□ 0.24
NEIL3-202ENST00000513321 FLVCR2Q9UPI3 526 aa16.52■□□□□ 0.24
NEIL3-202ENST00000513321 NUBP2Q9Y5Y2 271 aa16.52■□□□□ 0.24
NEIL3-202ENST00000513321 TRAV41A0A0B4J266 112 aa16.51■□□□□ 0.23
NEIL3-202ENST00000513321 RPL8P62917 257 aaKnown RBP16.51■□□□□ 0.23
NEIL3-202ENST00000513321 SUPT4H1P63272 117 aaKnown RBP16.51■□□□□ 0.23
NEIL3-202ENST00000513321 SLC35B1P78383 322 aa16.51■□□□□ 0.23
NEIL3-202ENST00000513321 DHODHQ02127 395 aa16.51■□□□□ 0.23
NEIL3-202ENST00000513321 ASAH1Q13510 395 aa16.51■□□□□ 0.23
NEIL3-202ENST00000513321 TMEM128Q5BJH2 165 aa16.51■□□□□ 0.23
NEIL3-202ENST00000513321 CENPSQ8N2Z9 138 aa16.51■□□□□ 0.23
NEIL3-202ENST00000513321 GALNT14Q96FL9 552 aa16.51■□□□□ 0.23
NEIL3-202ENST00000513321 CITED1Q99966 193 aa16.51■□□□□ 0.23
NEIL3-202ENST00000513321 CDS2O95674 445 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 CD28P10747 220 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 CRIP2P52943 208 aaPredicted RBP16.5■□□□□ 0.23
NEIL3-202ENST00000513321 TMEM267Q0VDI3 215 aaPredicted RBP16.5■□□□□ 0.23
NEIL3-202ENST00000513321 ECSCRQ19T08 205 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 HIST2H2BDQ6DRA6 164 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 MZT2BQ6NZ67 158 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 SLC25A42Q86VD7 318 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 CADM3Q8N126 398 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 LFNGQ8NES3 379 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 MSGN1A6NI15 193 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 SLC6A1P30531 599 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 MAS1LP35410 378 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 CFHR3Q02985 330 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 AKIRIN2Q53H80 203 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 C10orf55Q5SWW7 151 aa16.5■□□□□ 0.23
NEIL3-202ENST00000513321 SRSF12Q8WXF0 261 aaKnown RBP16.5■□□□□ 0.23
NEIL3-202ENST00000513321 TNCP24821 2201 aa16.49■□□□□ 0.23
NEIL3-202ENST00000513321 FBXO24O75426 580 aa16.49■□□□□ 0.23
NEIL3-202ENST00000513321 ATG12O94817 140 aa16.49■□□□□ 0.23
NEIL3-202ENST00000513321 HLA-GP17693 338 aa16.49■□□□□ 0.23
NEIL3-202ENST00000513321 PPIFP30405 207 aaKnown RBP16.49■□□□□ 0.23
NEIL3-202ENST00000513321 TMEM187Q14656 261 aa16.49■□□□□ 0.23
NEIL3-202ENST00000513321 C19orf54Q5BKX5 351 aa16.49■□□□□ 0.23
NEIL3-202ENST00000513321 TCTEX1D4Q5JR98 221 aa16.49■□□□□ 0.23
NEIL3-202ENST00000513321 UNQ5815/PRO19632Q6UWF5 114 aa16.49■□□□□ 0.23
NEIL3-202ENST00000513321 H2BFWTQ7Z2G1 175 aa16.49■□□□□ 0.23
NEIL3-202ENST00000513321 LHFPL5Q8TAF8 219 aa16.49■□□□□ 0.23
NEIL3-202ENST00000513321 FAM240BA0A1B0GVZ2 78 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 SNAPC5O75971 98 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 IGKV1-5P01602 117 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 TCRBP04435 133 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 OR9G9P0C7N8 305 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 ANXA3P12429 323 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 MYOD1P15172 320 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 VAMP1P23763 118 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 TEX38Q6PEX7 206 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 ZNF695Q8IW36 515 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 SELENOHQ8IZQ5 122 aaKnown RBP16.48■□□□□ 0.23
NEIL3-202ENST00000513321 MINDY2Q8NBR6 621 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 OR4X2Q8NGF9 303 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 TMEM56Q96MV1 263 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 PRR13Q9NZ81 148 aa16.48■□□□□ 0.23
NEIL3-202ENST00000513321 NSG2Q9Y328 171 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms