RNA–Protein interactions for RNA: ENST00000513178.1

CNGA1-206, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 3

Gene CNGA1, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-206ENST00000513178 FOXA2Q9Y261 457 aaPredicted RBP12.65□□□□□ -0.38
CNGA1-206ENST00000513178 SOX15O60248 233 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 ACTL6BO94805 426 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 NQO2P16083 231 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 PSMB8P28062 276 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 ETV6P41212 452 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 TAS2R31P59538 309 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 TMEM267Q0VDI3 215 aaPredicted RBP12.64□□□□□ -0.39
CNGA1-206ENST00000513178 OR4A47Q6IF82 309 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 C8orf86Q6ZUL3 223 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 MMD2Q8IY49 270 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 MINDY2Q8NBR6 621 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 DMBX1Q8NFW5 382 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 OR51S1Q8NGJ8 323 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 SRSF12Q8WXF0 261 aaKnown RBP12.64□□□□□ -0.39
CNGA1-206ENST00000513178 SRRQ9GZT4 340 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 KLK15Q9H2R5 256 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 HRASLSQ9HDD0 168 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 COMMD9Q9P000 198 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 NUBP2Q9Y5Y2 271 aa12.64□□□□□ -0.39
CNGA1-206ENST00000513178 IGLV1-40P01703 118 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 PTBP1P26599 531 aaKnown RBP eCLIP12.63□□□□□ -0.39
CNGA1-206ENST00000513178 LPAR6P43657 344 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 PIGPP57054 158 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 KLF9Q13886 244 aaPredicted RBP12.63□□□□□ -0.39
CNGA1-206ENST00000513178 AKIRIN2Q53H80 203 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 TMEM65Q6PI78 240 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 TOMM5Q8N4H5 51 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 TCTEX1D1Q8N7M0 179 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 RNF152Q8N8N0 203 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 TMEM167AQ8TBQ9 72 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 ZNF486Q96H40 463 aaPredicted RBP12.63□□□□□ -0.39
CNGA1-206ENST00000513178 PRRT1Q99946 306 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 PLEKHA2Q9HB19 425 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 TMEM140Q9NV12 185 aa12.63□□□□□ -0.39
CNGA1-206ENST00000513178 A6NHS1 94 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 MSGN1A6NI15 193 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 MPPED1O15442 326 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 PF4P02776 101 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 MYOD1P15172 320 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 ERVK-16P61578 105 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 RND3P61587 244 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 CNPY1Q3B7I2 92 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 ZNF585BQ52M93 769 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 ASPHD1Q5U4P2 390 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 OR5T1Q8NG75 326 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 ZFAND1Q8TCF1 268 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 MS4A10Q96PG2 267 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 AIFM2Q9BRQ8 373 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 ZFP57Q9NU63 452 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 COPZ2Q9P299 210 aa12.62□□□□□ -0.39
CNGA1-206ENST00000513178 C14orf166Q9Y224 244 aaKnown RBP12.62□□□□□ -0.39
CNGA1-206ENST00000513178 TRAV3A0A0B4J244 114 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 MARCH11A6NNE9 402 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 KRASP01116 189 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 CTSDP07339 412 aaPredicted RBP12.61□□□□□ -0.39
CNGA1-206ENST00000513178 G6PCP35575 357 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 ECI1P42126 302 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 AP3S2P59780 193 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 RPL8P62917 257 aaKnown RBP12.61□□□□□ -0.39
CNGA1-206ENST00000513178 POU2AF1Q16633 256 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 DEFB136Q30KP8 78 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 ZNF57Q68EA5 555 aaPredicted RBP12.61□□□□□ -0.39
CNGA1-206ENST00000513178 CCDC71LQ8N9Z2 235 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 OR5M8Q8NGP6 311 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 DUX3Q96PT4 197 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 OR5B12Q96R08 314 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 GNB4Q9HAV0 340 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 ZNF355PQ9NSJ1 428 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 SLC2A8Q9NY64 477 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 BET1LQ9NYM9 111 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 SCP2D1Q9UJQ7 156 aa12.61□□□□□ -0.39
CNGA1-206ENST00000513178 HLA-GP17693 338 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 FAUP35544 74 aaKnown RBP12.6□□□□□ -0.39
CNGA1-206ENST00000513178 RPL27AP46776 148 aaKnown RBP12.6□□□□□ -0.39
CNGA1-206ENST00000513178 RAB9AP51151 201 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 TPPP2P59282 170 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 DEFA5Q01523 94 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 TRIQKQ629K1 86 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 ETV3LQ6ZN32 361 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 OR4A5Q8NH83 315 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 MYOZ3Q8TDC0 251 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 FYTTD1Q96QD9 318 aaKnown RBP12.6□□□□□ -0.39
CNGA1-206ENST00000513178 TP53RKQ96S44 253 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 C5orf66Q9H5L9 145 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 COA4Q9NYJ1 87 aa12.6□□□□□ -0.39
CNGA1-206ENST00000513178 NOTCH1P46531 2555 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 NOTCH3Q9UM47 2321 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 HMX3A6NHT5 357 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 H0Y980 276 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 UPK2O00526 184 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 SERPINE2P07093 398 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 INPP1P49441 399 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 ZNF491Q8N8L2 437 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 GDPD1Q8N9F7 314 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 C4orf3Q8WVX3 66 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 SDHCQ99643 169 aaPredicted RBP12.59□□□□□ -0.39
CNGA1-206ENST00000513178 SPIN2AQ99865 258 aa12.59□□□□□ -0.39
CNGA1-206ENST00000513178 SPIN2BQ9BPZ2 258 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms