RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 HOXB4P17483 251 aaPredicted RBP12.3□□□□□ -0.44
SCLT1-209ENST00000511426 HSPE1P61604 102 aaKnown RBP12.3□□□□□ -0.44
SCLT1-209ENST00000511426 PAX8Q06710 450 aa12.3□□□□□ -0.44
SCLT1-209ENST00000511426 DEFB113Q30KQ7 82 aa12.3□□□□□ -0.44
SCLT1-209ENST00000511426 CLLU1Q5K131 121 aa12.3□□□□□ -0.44
SCLT1-209ENST00000511426 PRSS57Q6UWY2 283 aa12.3□□□□□ -0.44
SCLT1-209ENST00000511426 TMEM167AQ8TBQ9 72 aa12.3□□□□□ -0.44
SCLT1-209ENST00000511426 HIPK2Q9H2X6 1198 aa12.3□□□□□ -0.44
SCLT1-209ENST00000511426 NUP50Q9UKX7 468 aa12.3□□□□□ -0.44
SCLT1-209ENST00000511426 A0A1W2PPI3 338 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 IGSF23A1L1A6 192 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 CEBPZOSA8MTT3 80 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 FAM157AC9JC47 383 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 KBTBD11O94819 623 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 CFDP00746 253 aaPredicted RBP12.29□□□□□ -0.44
SCLT1-209ENST00000511426 LGALS4P56470 323 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 RPS16P62249 146 aaKnown RBP12.29□□□□□ -0.44
SCLT1-209ENST00000511426 DIAPH2-AS1Q14236 149 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 TMEM14EPQ6UXP3 125 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 VKORC1L1Q8N0U8 176 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 TEX45Q8NA69 505 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 QTRT1Q9BXR0 403 aaKnown RBP12.29□□□□□ -0.44
SCLT1-209ENST00000511426 SLC25A32Q9H2D1 315 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 MMP26Q9NRE1 261 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 STRAPQ9Y3F4 350 aaKnown RBP12.29□□□□□ -0.44
SCLT1-209ENST00000511426 B4DSR2 109 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 INS-IGF2F8WCM5 200 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 RNASEK-C17orf49H0YIS7 233 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 NXPH3O95157 252 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 OR1S2Q8NGQ3 325 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 MALSU1Q96EH3 234 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 ARV1Q9H2C2 271 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 TCF19Q9Y242 345 aa12.29□□□□□ -0.44
SCLT1-209ENST00000511426 FLNCQ14315 2725 aa12.28□□□□□ -0.44
SCLT1-209ENST00000511426 TRAV20A0A0B4J274 112 aa12.28□□□□□ -0.44
SCLT1-209ENST00000511426 SRRM4A7MD48 611 aaKnown RBP12.28□□□□□ -0.44
SCLT1-209ENST00000511426 MSMBP08118 114 aa12.28□□□□□ -0.44
SCLT1-209ENST00000511426 IAPPP10997 89 aa12.28□□□□□ -0.44
SCLT1-209ENST00000511426 OR2B8PP59922 312 aa12.28□□□□□ -0.44
SCLT1-209ENST00000511426 RPL8P62917 257 aaKnown RBP12.28□□□□□ -0.44
SCLT1-209ENST00000511426 NHLH2Q02577 135 aa12.28□□□□□ -0.44
SCLT1-209ENST00000511426 ATP6V1FQ16864 119 aa12.28□□□□□ -0.44
SCLT1-209ENST00000511426 MOB3BQ86TA1 216 aa12.28□□□□□ -0.44
SCLT1-209ENST00000511426 PINX1Q96BK5 328 aaKnown RBP12.28□□□□□ -0.44
SCLT1-209ENST00000511426 TBX15Q96SF7 602 aa12.28□□□□□ -0.44
SCLT1-209ENST00000511426 COL12A1Q99715 3063 aa12.27□□□□□ -0.45
SCLT1-209ENST00000511426 IGLV2-23P01705 113 aa12.27□□□□□ -0.45
SCLT1-209ENST00000511426 MAS1LP35410 378 aa12.27□□□□□ -0.45
SCLT1-209ENST00000511426 HTR2BP41595 481 aa12.27□□□□□ -0.45
SCLT1-209ENST00000511426 PRCDQ00LT1 54 aa12.27□□□□□ -0.45
SCLT1-209ENST00000511426 LOXL1Q08397 574 aaPredicted RBP12.27□□□□□ -0.45
SCLT1-209ENST00000511426 SPANXN5Q5MJ07 72 aa12.27□□□□□ -0.45
SCLT1-209ENST00000511426 RPL7L1Q6DKI1 246 aaKnown RBP12.27□□□□□ -0.45
SCLT1-209ENST00000511426 MRPL41Q8IXM3 137 aaKnown RBP12.27□□□□□ -0.45
SCLT1-209ENST00000511426 OR5C1Q8NGR4 320 aa12.27□□□□□ -0.45
SCLT1-209ENST00000511426 ATP5SQ99766 215 aa12.27□□□□□ -0.45
SCLT1-209ENST00000511426 PARD6GQ9BYG4 376 aaPredicted RBP12.27□□□□□ -0.45
SCLT1-209ENST00000511426 ENY2Q9NPA8 101 aa12.27□□□□□ -0.45
SCLT1-209ENST00000511426 OR51B2Q9Y5P1 312 aa12.27□□□□□ -0.45
SCLT1-209ENST00000511426 SEC11BP0C7V7 166 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 COL8A1P27658 744 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 VDAC2P45880 294 aaPredicted RBP12.26□□□□□ -0.45
SCLT1-209ENST00000511426 ALKAL2Q6UX46 152 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 MMD2Q8IY49 270 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 NRGNQ92686 78 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 GINS3Q9BRX5 216 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 COMMD5Q9GZQ3 224 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 TRAV3A0A0B4J244 114 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 A0A1W2PN81 502 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 CHRNA7P36544 502 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 HOXA1P49639 335 aaPredicted RBP12.26□□□□□ -0.45
SCLT1-209ENST00000511426 DLX1P56177 255 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 KLRD1Q13241 179 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 OR10P1Q8NGE3 313 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 OR1L8Q8NGR8 309 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 RNF141Q8WVD5 230 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 CFHR4Q92496 578 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 GGACTQ9BVM4 153 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 PLEKHA3Q9HB20 300 aa12.26□□□□□ -0.45
SCLT1-209ENST00000511426 RPS10-NUDT3A0A1W2PQS6 291 aa12.25□□□□□ -0.45
SCLT1-209ENST00000511426 H3BP45 60 aa12.25□□□□□ -0.45
SCLT1-209ENST00000511426 TIMM23O14925 209 aa12.25□□□□□ -0.45
SCLT1-209ENST00000511426 CST7O76096 145 aa12.25□□□□□ -0.45
SCLT1-209ENST00000511426 VENTXO95231 258 aa12.25□□□□□ -0.45
SCLT1-209ENST00000511426 DYNLT3P51808 116 aa12.25□□□□□ -0.45
SCLT1-209ENST00000511426 F2RL1P55085 397 aa12.25□□□□□ -0.45
SCLT1-209ENST00000511426 RAB11AP62491 216 aa12.25□□□□□ -0.45
SCLT1-209ENST00000511426 ZDHHC16Q969W1 377 aa12.25□□□□□ -0.45
SCLT1-209ENST00000511426 GNPNAT1Q96EK6 184 aaPredicted RBP12.25□□□□□ -0.45
SCLT1-209ENST00000511426 SMIM3Q9BZL3 60 aa12.25□□□□□ -0.45
SCLT1-209ENST00000511426 HEYLQ9NQ87 328 aaPredicted RBP12.25□□□□□ -0.45
SCLT1-209ENST00000511426 A0A096LNT2 108 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 J3QLI3 93 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 MOSP00540 346 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 IFNA5P01569 189 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 CRYGBP07316 175 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 OR8U8P0C7N1 319 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 METTL15P1P0C7V9 234 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 RAB5CP51148 216 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 EBI3Q14213 229 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms