RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 FAM183AA6NL82 134 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 INMT-MINDY4F8WBC2 141 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 SMIM17P0DL12 118 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 FAM236CP0DP71 79 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 CDKN2AP42771 156 aaKnown RBP7.95□□□□□ -1.14
USP53-207ENST00000510852 MEF2DQ14814 521 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 RAB35Q15286 201 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 MFSD4AQ8N468 514 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 OR51A2Q8NGJ7 313 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 OR10G7Q8NGN6 311 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 ZPLD1Q8TCW7 415 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 NMNAT3Q96T66 252 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 MLST8Q9BVC4 326 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 TAF9BQ9HBM6 251 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 CBLN4Q9NTU7 201 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 DNAJC27Q9NZQ0 273 aa7.95□□□□□ -1.14
USP53-207ENST00000510852 SMG1Q96Q15 3661 aaKnown RBP7.95□□□□□ -1.14
USP53-207ENST00000510852 A0A1B0GX51 115 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 H7C1C5 153 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 M0R2Z0 102 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 XKRYO14609 159 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 PHOX2AO14813 284 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 LCN6P62502 163 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 SLC25A30Q5SVS4 291 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 ZIC4Q8N9L1 334 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 MGLLQ99685 303 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 MDFIQ99750 246 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 NIPSNAP3BQ9BS92 247 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 EMC6Q9BV81 110 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 ING1Q9UK53 422 aaPredicted RBP7.94□□□□□ -1.14
USP53-207ENST00000510852 IGHV2OR16-5A0A0B4J2B6 119 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 CRLF1O75462 422 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 EDNRAP25101 427 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 GPR6P46095 362 aaPredicted RBP7.94□□□□□ -1.14
USP53-207ENST00000510852 CLDN17P56750 224 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 RPS25P62851 125 aaKnown RBP7.94□□□□□ -1.14
USP53-207ENST00000510852 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
USP53-207ENST00000510852 UBE2V2Q15819 145 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 TMEM241Q24JQ0 296 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 COX8CQ7Z4L0 72 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 ZNF433Q8N7K0 673 aaPredicted RBP7.94□□□□□ -1.14
USP53-207ENST00000510852 PIFOQ8TCI5 191 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 GPR84Q9NQS5 396 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 FLVCR1Q9Y5Y0 555 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 COX11Q9Y6N1 276 aa7.94□□□□□ -1.14
USP53-207ENST00000510852 TRAV38-1A0A0B4J264 116 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 A0A1B0GW64 132 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 A1L4Q6 167 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 GAGE12JA6NER3 117 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 GAGE7O76087 117 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 GAGE12FP0CL80 117 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 GAGE12GP0CL81 117 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 GAGE12IP0CL82 117 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 MYL12AP19105 171 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 TNFSF8P32971 234 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 GAGE4Q13068 117 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 IAH1Q2TAA2 248 aaPredicted RBP7.93□□□□□ -1.14
USP53-207ENST00000510852 TIGITQ495A1 244 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 GGNBP1Q5YKI7 109 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 GFRALQ6UXV0 394 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 BPIFB6Q8NFQ5 453 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 OR2T4Q8NH00 348 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 OR1S1Q8NH92 325 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 CLCF1Q9UBD9 225 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 KLK11Q9UBX7 282 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 ALPK2Q86TB3 2170 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 IGKV3D-15A0A087WSY6 115 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 F5H697 171 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 RENP00797 406 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 ORM2P19652 201 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 MYL9P24844 172 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 DLX1P56177 255 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 NXNL2Q5VZ03 156 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 IL34Q6ZMJ4 242 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 Q6ZVH6 145 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 FAM57AQ8TBR7 257 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 SLC25A44Q96H78 314 aaPredicted RBP7.93□□□□□ -1.14
USP53-207ENST00000510852 TMEM59Q9BXS4 323 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 NPFFR1Q9GZQ6 430 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 EXOSC4Q9NPD3 245 aaKnown RBP7.93□□□□□ -1.14
USP53-207ENST00000510852 DUSP13Q9UII6 198 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 SVILO95425 2214 aa7.93□□□□□ -1.14
USP53-207ENST00000510852 K7EMT4 169 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 PDCD5O14737 125 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 KBTBD11O94819 623 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 ZNF432O94892 652 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 NDUFB8O95169 186 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 MOSP00540 346 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 IGHG1P01857 330 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 GYPBP06028 91 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 PGA4P0DJD7 388 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 PGA3P0DJD8 388 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 BMP4P12644 408 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 BLVRBP30043 206 aaPredicted RBP7.92□□□□□ -1.14
USP53-207ENST00000510852 AGTR1P30556 359 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 SLC25A1P53007 311 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 RBM39Q14498 530 aaKnown RBP7.92□□□□□ -1.14
USP53-207ENST00000510852 IZUMO4Q1ZYL8 232 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 C1QL4Q86Z23 238 aa7.92□□□□□ -1.14
USP53-207ENST00000510852 MBD3L1Q8WWY6 194 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms