RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 PF4P02776 101 aa11.55□□□□□ -0.56
HMGCL-208ENST00000509389 NFYBP25208 207 aa11.55□□□□□ -0.56
HMGCL-208ENST00000509389 DUTP33316 252 aaKnown RBP11.55□□□□□ -0.56
HMGCL-208ENST00000509389 BRWD1-AS2P59051 145 aa11.55□□□□□ -0.56
HMGCL-208ENST00000509389 RPL30P62888 115 aaKnown RBP11.55□□□□□ -0.56
HMGCL-208ENST00000509389 ZNF833PQ6ZTB9 187 aa11.55□□□□□ -0.56
HMGCL-208ENST00000509389 OR4X2Q8NGF9 303 aa11.55□□□□□ -0.56
HMGCL-208ENST00000509389 OR9G1Q8NH87 305 aa11.55□□□□□ -0.56
HMGCL-208ENST00000509389 LEAP2Q969E1 77 aa11.55□□□□□ -0.56
HMGCL-208ENST00000509389 ST6GALNAC6Q969X2 333 aa11.55□□□□□ -0.56
HMGCL-208ENST00000509389 PRR13Q9NZ81 148 aa11.55□□□□□ -0.56
HMGCL-208ENST00000509389 SAA2-SAA4A0A096LPE2 208 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 GOSR2O14653 212 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 RAB29O14966 203 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 RBFOX2O43251 390 aaKnown RBP eCLIP11.54□□□□□ -0.56
HMGCL-208ENST00000509389 SAA2P0DJI9 122 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-208ENST00000509389 GPR12P47775 334 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 RAP2BP61225 183 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 IL15RAQ13261 267 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 ZNF585BQ52M93 769 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 C9orf152Q5JTZ5 239 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 LGI3Q8N145 548 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 GPHA2Q96T91 129 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 RBM7Q9Y580 266 aaKnown RBP11.54□□□□□ -0.56
HMGCL-208ENST00000509389 PIGBOS1A0A0B4J2F0 54 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 FAM90A9PA6NNJ1 464 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 BOLA2-SMG1P6H3BVE0 249 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 J3QR06 171 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 K7EIL1 84 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 M0QZK8 103 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 TNFSF12O43508 249 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 IGKV1-39P01597 117 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 C1QBP02746 253 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 IGKV1D-39P04432 117 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 RPA2P15927 270 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 CATR1Q13166 79 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 SP6Q3SY56 376 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 KHDC1LQ5JSQ8 128 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 LIN54Q6MZP7 749 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 CCDC144NLQ6NUI1 221 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 RBPMSQ93062 196 aaKnown RBP11.54□□□□□ -0.56
HMGCL-208ENST00000509389 RCC1LQ96I51 464 aaKnown RBP11.54□□□□□ -0.56
HMGCL-208ENST00000509389 RNF150Q9ULK6 438 aa11.54□□□□□ -0.56
HMGCL-208ENST00000509389 LINC00473A8K010 186 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 ADAP1O75689 374 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 IGHV3-7P01780 117 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 P0C879 139 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 FAM106CPP0CH98 169 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 NMSQ5H8A3 153 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 THNSL2Q86YJ6 484 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 SELENOHQ8IZQ5 122 aaKnown RBP11.53□□□□□ -0.56
HMGCL-208ENST00000509389 OR51H1Q8NH63 302 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 RPEQ96AT9 228 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 NMES1Q9C002 83 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 MOB4Q9Y3A3 225 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 TMED3Q9Y3Q3 217 aa11.53□□□□□ -0.56
HMGCL-208ENST00000509389 A0A1W2PPE3 182 aa11.52□□□□□ -0.57
HMGCL-208ENST00000509389 CCSO14618 274 aa11.52□□□□□ -0.57
HMGCL-208ENST00000509389 SNRNP70P08621 437 aaKnown RBP11.52□□□□□ -0.57
HMGCL-208ENST00000509389 GNG10P50151 68 aa11.52□□□□□ -0.57
HMGCL-208ENST00000509389 KRTAP10-11P60412 298 aa11.52□□□□□ -0.57
HMGCL-208ENST00000509389 RPL39P5Q59GN2 51 aa11.52□□□□□ -0.57
HMGCL-208ENST00000509389 SLC35G3Q8N808 338 aa11.52□□□□□ -0.57
HMGCL-208ENST00000509389 WDR89Q96FK6 387 aaPredicted RBP11.52□□□□□ -0.57
HMGCL-208ENST00000509389 ADTRPQ96IZ2 230 aa11.52□□□□□ -0.57
HMGCL-208ENST00000509389 AMMECR1Q9Y4X0 333 aaPredicted RBP11.52□□□□□ -0.57
HMGCL-208ENST00000509389 A0A1W2PPI3 338 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 PSMB11A5LHX3 300 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 MPTX1A8MV57 137 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 SIX6O95475 246 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 THBS3P49746 956 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 DIAPH2-AS1Q14236 149 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 TMEM268Q5VZI3 342 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 GGNBP1Q5YKI7 109 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 ZNF329Q86UD4 541 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 LINC00482Q8N8I6 264 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 UXS1Q8NBZ7 420 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 CD300LFQ8TDQ1 290 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 LSM10Q969L4 123 aaKnown RBP11.51□□□□□ -0.57
HMGCL-208ENST00000509389 OR10C1Q96KK4 312 aa11.51□□□□□ -0.57
HMGCL-208ENST00000509389 WI2-2373I1.2A0A1W2PRP0 233 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 M0R1X1 148 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 HNRNPCP07910 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
HMGCL-208ENST00000509389 SLC25A6P12236 298 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 VDAC1P21796 283 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 KIR2DS2P43631 304 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 HES1Q14469 280 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 GSG1LQ6UXU4 331 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 LYZL2Q7Z4W2 148 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 C5orf56Q8N8D9 126 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 ZNF383Q8NA42 475 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 C2orf50Q96LR7 162 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 S1PR3Q99500 378 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 COMMD9Q9P000 198 aa11.5□□□□□ -0.57
HMGCL-208ENST00000509389 TRAV14DV4A0A0A6YYC5 116 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 RAMP3O60896 148 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 IGKV1-5P01602 117 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 HOXB5P09067 269 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 CT45A6P0DMU7 189 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms