RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 TMEM30BQ3MIR4 351 aa9.54□□□□□ -0.88
PRPF40B-203ENST00000508736 ACSM6Q6P461 480 aa9.54□□□□□ -0.88
PRPF40B-203ENST00000508736 RPP25LQ8N5L8 163 aaKnown RBP9.54□□□□□ -0.88
PRPF40B-203ENST00000508736 ZNRF1Q8ND25 227 aa9.54□□□□□ -0.88
PRPF40B-203ENST00000508736 OR52E5Q8NH55 327 aa9.54□□□□□ -0.88
PRPF40B-203ENST00000508736 OR4S2Q8NH73 311 aa9.54□□□□□ -0.88
PRPF40B-203ENST00000508736 QTRT1Q9BXR0 403 aaKnown RBP9.54□□□□□ -0.88
PRPF40B-203ENST00000508736 TMEM242Q9NWH2 141 aa9.54□□□□□ -0.88
PRPF40B-203ENST00000508736 GAB2Q9UQC2 676 aa9.54□□□□□ -0.88
PRPF40B-203ENST00000508736 FAM208BQ5VWN6 2430 aa9.54□□□□□ -0.88
PRPF40B-203ENST00000508736 TRGV10A0A0A0MS01 117 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 AP4M1O00189 453 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 CCL21O00585 134 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 CYB5BO43169 146 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 MPDU1O75352 247 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 EIF3GO75821 320 aaKnown RBP eCLIP9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 NQO2P16083 231 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 LOXL3P58215 753 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 ELOBQ15370 118 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 ACOT6Q3I5F7 207 aaPredicted RBP9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 IQCF2Q8IXL9 164 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 DMRTC2Q8IXT2 367 aaPredicted RBP9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 CTDSP1Q9GZU7 261 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 IFI27L2Q9H2X8 130 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 MS4A5Q9H3V2 200 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 SLC25A22Q9H936 323 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 PCP4L1A6NKN8 68 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 C15orf62A8K5M9 175 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 ZNF727A8MUV8 499 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 TMEM250H0YL14 139 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 CLDN34H7C241 214 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 TGOLN2O43493 480 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 OR9G9P0C7N8 305 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 S100A12P80511 92 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 TFF3Q07654 80 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 FABP9Q0Z7S8 132 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 C1orf87Q8N0U7 546 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 Q8WTZ3 238 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 ADTRPQ96IZ2 230 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 GAFA1Q96PS6 74 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 GGACTQ9BVM4 153 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 LINC00574Q9H8X3 128 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 SDF2L1Q9HCN8 221 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 NAT8Q9UHE5 227 aa9.53□□□□□ -0.88
PRPF40B-203ENST00000508736 PLCE1Q9P212 2302 aa9.52□□□□□ -0.88
PRPF40B-203ENST00000508736 RELNP78509 3460 aa9.52□□□□□ -0.88
PRPF40B-203ENST00000508736 RAI1Q7Z5J4 1906 aaPredicted RBP9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 E7EQL1 145 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 IFNA10P01566 189 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 IGKV1D-33P01593 117 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 IGKV1-33P01594 117 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 IGHV2-5P01817 119 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 CD3EP07766 207 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 APOBEC3AP31941 199 aaPredicted RBP9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 THBS3P49746 956 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 CCL8P80075 99 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 KIAA0141Q14154 515 aaPredicted RBP9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 ZNF674Q2M3X9 581 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 PDLIM3Q53GG5 364 aaPredicted RBP9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 SPINK9Q5DT21 86 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 OR13D1Q8NGV5 346 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 CORO2AQ92828 525 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 PLPPR2Q96GM1 343 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 HEYLQ9NQ87 328 aaPredicted RBP9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 KCNIP2Q9NS61 270 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 GFOD1Q9NXC2 390 aa9.52□□□□□ -0.89
PRPF40B-203ENST00000508736 ZNF462Q96JM2 2506 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 TRAV38-1A0A0B4J264 116 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 KBTBD11-OT1A0A1B0GTJ5 212 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 B9A039 149 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 MDKP21741 143 aaPredicted RBP9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 CD1BP29016 333 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 RPL39P5Q59GN2 51 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 FAM201AQ5SY85 155 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 CYP2G1PQ6ZSU1 146 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 SSX9Q7RTT3 188 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 SAP30LQ9HAJ7 183 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 WDR83OSQ9Y284 106 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 DSCAMO60469 2012 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 A0A1W2PPE3 182 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 SMCO3A2RU48 225 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 ZNF729A6NN14 1252 aaPredicted RBP9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 PROP1O75360 226 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 KBTBD11O94819 623 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 OPN1MWP04001 364 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 OPN1MW2P0DN77 364 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 OPN1MW3P0DN78 364 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 CDC34P49427 236 aaPredicted RBP9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 RND2P52198 227 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 LINC00205P59089 165 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 HNF4GQ14541 408 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 C17orf58Q2M2W7 97 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 WDR25Q64LD2 544 aaPredicted RBP9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 ZNF343Q6P1L6 599 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 RAB24Q969Q5 203 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 URGCP-MRPS24S4R325 110 aa9.51□□□□□ -0.89
PRPF40B-203ENST00000508736 PPIAL4EA0A075B759 164 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms