RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 H0Y980 276 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 NDUFA3O95167 84 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 HPRT1P00492 218 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 CA2P00918 260 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 SERPINE2P07093 398 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 H2AFB2P0C5Z0 115 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 OR9G9P0C7N8 305 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 ECI1P42126 302 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 KIR2DS2P43631 304 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 LGALS7P47929 136 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 OR2B8PP59922 312 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 CX3CL1P78423 397 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 CBX3Q13185 183 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 TMEM187Q14656 261 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 OR4A47Q6IF82 309 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 ZNF329Q86UD4 541 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 SGPP2Q8IWX5 399 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 SELENOHQ8IZQ5 122 aaKnown RBP6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 DMBX1Q8NFW5 382 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 LINC01006Q8NI28 216 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 OSR1Q8TAX0 266 aaPredicted RBP6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 DEDD2Q8WXF8 326 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 SCGB3A2Q96PL1 93 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 PRSS22Q9GZN4 317 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 NPFFR1Q9GZQ6 430 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 RANBP3Q9H6Z4 567 aaPredicted RBP6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 ZNF430Q9H8G1 570 aaPredicted RBP6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 TMEM140Q9NV12 185 aa6.98□□□□□ -1.29
SCAMP1-202ENST00000506858 G3V318 75 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 RBFOX2O43251 390 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 FGF16O43320 207 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 OR2A4O95047 310 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 OR4E1P0C645 316 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 HKR1P10072 659 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 EGR2P11161 476 aaPredicted RBP6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 NQO2P16083 231 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 UCP1P25874 307 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 KRTAP10-3P60369 221 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 UBE2KP61086 200 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 DHODHQ02127 395 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 PRSS8Q16651 343 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 VMA21Q3ZAQ7 101 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 C4orf46Q504U0 113 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 SPINK9Q5DT21 86 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 TMEM268Q5VZI3 342 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 Q6ZRM9 215 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 C19orf35Q6ZS72 473 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 LCNL1Q6ZST4 164 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 LYZL2Q7Z4W2 148 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 PPP1R27Q86WC6 154 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 FAM219AQ8IW50 185 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 GRPEL2Q8TAA5 225 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 ABHD5Q8WTS1 349 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 SEC22AQ96IW7 307 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 OR2A7Q96R45 310 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 KRTAP4-7Q9BYR0 210 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 TMEM222Q9H0R3 208 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 PLEKHA2Q9HB19 425 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 RAB18Q9NP72 206 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 PARP11Q9NR21 331 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 SERTAD4Q9NUC0 356 aa6.97□□□□□ -1.29
SCAMP1-202ENST00000506858 DNHD1Q96M86 4753 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 A0A1B0GW64 132 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 C9orf170A2RU37 121 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 HMX3A6NHT5 357 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 MARCH11A6NNE9 402 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 ATP6V0E1O15342 81 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 TSPAN9O75954 239 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 NXPH3O95157 252 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 CNIH1O95406 144 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 SFT2D2O95562 160 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 HRASP01112 189 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 TAS2R31P59538 309 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 DEFA1P59665 94 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 DEFA3P59666 94 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 DHRS2Q13268 280 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 DCTN2Q13561 401 aaKnown RBP6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 FXYD3Q14802 87 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 TNXAQ16473 311 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 TMEM128Q5BJH2 165 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 C11orf87Q6NUJ2 197 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 C16orf82Q7Z2V1 217 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 SLC35E3Q7Z769 313 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 ZNF695Q8IW36 515 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 PUSL1Q8N0Z8 303 aaKnown RBP6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 UXS1Q8NBZ7 420 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 OR8H1Q8NGG4 311 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 CD300LFQ8TDQ1 290 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 GPR146Q96CH1 333 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 RNF5Q99942 180 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 KCNIP3Q9Y2W7 256 aa6.96□□□□□ -1.3
SCAMP1-202ENST00000506858 WNK1Q9H4A3 2382 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 INMT-MINDY4F8WBC2 141 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 M0QZK8 103 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 UPK2O00526 184 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 KBTBD11O94819 623 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 CDS2O95674 445 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 IGHG2P01859 326 aa6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 HLA-AP01891 365 aaKnown RBP6.95□□□□□ -1.3
SCAMP1-202ENST00000506858 HLA-DRB1P01911 266 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms