RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 SMIM21Q3B7S5 101 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 SCGB2B2Q4G0G5 96 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 LINC01620Q4KN68 170 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ABCA11PQ4W5N1 156 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 TMEM128Q5BJH2 165 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 BEX5Q5H9J7 111 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR2T2Q6IF00 324 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR10K2Q6IF99 312 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 Q6ZS49 121 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 MOB1BQ7L9L4 216 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CALHM1Q8IU99 346 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 SGPP2Q8IWX5 399 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CMTM1Q8IZ96 169 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC38A6Q8IZM9 456 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 TCTE3Q8IZS6 198 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CEND1Q8N111 149 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CCDC71LQ8N9Z2 235 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 BHLHE23Q8NDY6 225 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR2Z1Q8NG97 314 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR5AU1Q8NGC0 362 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR51S1Q8NGJ8 323 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR52B4Q8NGK2 314 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR5D18Q8NGL1 313 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR5D13Q8NGL4 314 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR4C16Q8NGL9 310 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR4A4PQ8NGN8 299 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR11L1Q8NGX0 322 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR10Z1Q8NGY1 313 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR10J5Q8NHC4 309 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 COQ8AQ8NI60 647 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 NEK7Q8TDX7 302 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 GIMAP1Q8WWP7 306 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 EMG1Q92979 244 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 GALMQ96C23 342 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 PHYHIPLQ96FC7 376 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 PIK3IP1Q96FE7 263 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ARHGAP5-AS1Q96IT6 56 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 NOL4LQ96MY1 436 aaPredicted RBP1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 SPACA5Q96QH8 159 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 PHB2Q99623 299 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 NRIP2Q9BQI9 281 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 FAAP24Q9BTP7 215 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ADAT1Q9BUB4 502 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 C1QTNF6Q9BXI9 259 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 PECRQ9BY49 303 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 PPA2Q9H2U2 334 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR51B6Q9H340 312 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OR51J1Q9H342 316 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 NCOR1P1Q9H4R4 102 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 FN3KRPQ9HA64 309 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF286AQ9HBT8 521 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 YAE1D1Q9NRH1 226 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CA10Q9NS85 328 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 C1orf123Q9NWV4 160 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 MTCH1Q9NZJ7 389 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 COMMD9Q9P000 198 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 TAAR3PQ9P1P4 343 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 CACFD1Q9UGQ2 172 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 OPN4Q9UHM6 478 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ANXA10Q9UJ72 324 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF222Q9UK12 451 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 TRAPPC2LQ9UL33 140 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 ANAPC10Q9UM13 185 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 C14orf166Q9Y224 244 aaKnown RBP1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 NPTNQ9Y639 398 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 USP34Q70CQ2 3546 aa1.78□□□□□ -2.12
TOPBP1-205ENST00000506779 SDK2Q58EX2 2172 aa1.78□□□□□ -2.13
TOPBP1-205ENST00000506779 PI4KAP42356 2102 aa1.78□□□□□ -2.13
TOPBP1-205ENST00000506779 CABIN1Q9Y6J0 2220 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 IGLV3-9A0A075B6K5 115 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 IGKV1-27A0A075B6S5 117 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 MEIKINA0A087WXM9 373 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 TRAV38-1A0A0B4J264 116 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 A0A0B4J2A0 478 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 IGKV1-12A0A0C4DH73 117 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM30CPA0ZSE6 113 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 C5orf63A6NC05 138 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ATP6V1G2-DDX39BF2Z307 99 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 F5H5P2 479 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 M0R233 179 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ABCD4O14678 606 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ANGPTL7O43827 346 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SERF1AO75920 110 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 ATG12O94817 140 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 FSTL3O95633 263 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 HAND1O96004 215 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 IFNA21P01568 189 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 IGKV1D-12P01611 117 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 HLA-AP01891 365 aaKnown RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 PMP2P02689 132 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 C1QBP02746 253 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 RLN2P04090 185 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 CSN2P05814 226 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 CTSDP07339 412 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 GIPP09681 153 aaPredicted RBP1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 OR4A8P0C604 315 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 OR4E1P0C645 316 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 PGA5P0DJD9 388 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SULT1A3P0DMM9 295 aa1.77□□□□□ -2.13
TOPBP1-205ENST00000506779 SULT1A4P0DMN0 295 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms