RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 RPL31P62899 125 aaKnown RBP13.29□□□□□ -0.28
SCLT1-208ENST00000506368 IGFBP7Q16270 282 aa13.29□□□□□ -0.28
SCLT1-208ENST00000506368 PDLIM3Q53GG5 364 aaPredicted RBP13.29□□□□□ -0.28
SCLT1-208ENST00000506368 Q6P435 159 aa13.29□□□□□ -0.28
SCLT1-208ENST00000506368 SLC25A45Q8N413 288 aa13.29□□□□□ -0.28
SCLT1-208ENST00000506368 FGFBP3Q8TAT2 258 aa13.29□□□□□ -0.28
SCLT1-208ENST00000506368 LINC00470Q9BZP3 86 aa13.29□□□□□ -0.28
SCLT1-208ENST00000506368 SH2D2AQ9NP31 389 aa13.29□□□□□ -0.28
SCLT1-208ENST00000506368 TRAV9-2A0A087WT02 112 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 LOC102723996A0A087X1L8 192 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 TRAV38-1A0A0B4J264 116 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 AMY1AP04745 511 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 MYF5P13349 255 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 G6PCP35575 357 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 ZNF83P51522 516 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 EIF4EBP1Q13541 118 aaPredicted RBP13.28□□□□□ -0.28
SCLT1-208ENST00000506368 LRRC10Q5BKY1 277 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 PET117Q6UWS5 81 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 TMEM136Q6ZRR5 245 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 MUC15Q8N387 334 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 C15orf62A8K5M9 175 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 J3QT63 122 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 SELENOVP59797 346 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 NIT1Q86X76 327 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 SCCPDHQ8NBX0 429 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 RARRES3Q9UL19 164 aa13.28□□□□□ -0.28
SCLT1-208ENST00000506368 F2Z2F3 143 aa13.27□□□□□ -0.28
SCLT1-208ENST00000506368 K7EN84 100 aa13.27□□□□□ -0.28
SCLT1-208ENST00000506368 SH2D1BO14796 132 aa13.27□□□□□ -0.28
SCLT1-208ENST00000506368 ALKBH2Q6NS38 261 aa13.27□□□□□ -0.28
SCLT1-208ENST00000506368 OR2M7Q8NG81 312 aa13.27□□□□□ -0.28
SCLT1-208ENST00000506368 FAM122AQ96E09 287 aa13.27□□□□□ -0.28
SCLT1-208ENST00000506368 RNF114Q9Y508 228 aa13.27□□□□□ -0.28
SCLT1-208ENST00000506368 LINC00869P0C866 280 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 PMCHP20382 165 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 GCHFRP30047 84 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 NTF4P34130 210 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 GABRA2P47869 451 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 THBS3P49746 956 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 SSR4P51571 173 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 PSG7Q13046 419 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 FAM162BQ5T6X4 162 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 OR8I2Q8N0Y5 310 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 ST6GALNAC3Q8NDV1 305 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 OR52E5Q8NH55 327 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 SAP25Q8TEE9 199 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 WDR54Q9H977 334 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 PROK2Q9HC23 129 aa13.27□□□□□ -0.29
SCLT1-208ENST00000506368 J3QR06 171 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 SLC17A3O00476 420 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 ISLRO14498 428 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 CER1O95813 267 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 CA2P00918 260 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 IGHEP01854 428 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 CCL3P10147 92 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 CEACAM8P31997 349 aaPredicted RBP13.26□□□□□ -0.29
SCLT1-208ENST00000506368 EDDM3BP56851 147 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 VASH2Q86V25 355 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 WIPF2Q8TF74 440 aaPredicted RBP13.26□□□□□ -0.29
SCLT1-208ENST00000506368 FAM216AQ8WUB2 273 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 POLDIP2Q9Y2S7 368 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 WDFY3Q8IZQ1 3526 aa13.26□□□□□ -0.29
SCLT1-208ENST00000506368 GFRA3O60609 400 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 TOX4O94842 621 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 HINT1P49773 126 aaPredicted RBP13.25□□□□□ -0.29
SCLT1-208ENST00000506368 B3GALT5-AS1P59052 145 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 PCOLCEQ15113 449 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 SPATA46Q5T0L3 261 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 UNQ5815/PRO19632Q6UWF5 114 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 GGNQ86UU5 652 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 ZNF439Q8NDP4 499 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 TSKUQ8WUA8 353 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 OR2D2Q9H210 308 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 SLC25A10Q9UBX3 287 aaPredicted RBP13.25□□□□□ -0.29
SCLT1-208ENST00000506368 RAMP3O60896 148 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 NEURL1O76050 574 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 GNG4P50150 75 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 RTL8BQ17RB0 113 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 TREML4Q6UXN2 200 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 ZDHHC16Q969W1 377 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 GALMQ96C23 342 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 HSD17B10Q99714 261 aaKnown RBP13.25□□□□□ -0.29
SCLT1-208ENST00000506368 GGTLC1Q9BX51 225 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 HES4Q9HCC6 221 aa13.25□□□□□ -0.29
SCLT1-208ENST00000506368 ASXL3Q9C0F0 2248 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 RBMXL2O75526 392 aaKnown RBP13.24□□□□□ -0.29
SCLT1-208ENST00000506368 ARR3P36575 388 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 GFRA1P56159 465 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 CLDN18P56856 261 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 ZNF816Q0VGE8 651 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-208ENST00000506368 MRPL14Q6P1L8 145 aaKnown RBP13.24□□□□□ -0.29
SCLT1-208ENST00000506368 COMMD5Q9GZQ3 224 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 TMEM167BQ9NRX6 74 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 C1RLQ9NZP8 487 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 YTHDF2Q9Y5A9 579 aaKnown RBP13.24□□□□□ -0.29
SCLT1-208ENST00000506368 A0A1W2PR80 420 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 A0A1W2PRS3 328 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 SMIM27A0A1W2PRY6 76 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 H0YJW9 148 aa13.24□□□□□ -0.29
SCLT1-208ENST00000506368 BMPR1BO00238 502 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms