RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 TCTEX1D1Q8N7M0 179 aa14.24□□□□□ -0.13
SQSTM1-209ENST00000504627 CASTOR1Q8WTX7 329 aa14.24□□□□□ -0.13
SQSTM1-209ENST00000504627 ADTRPQ96IZ2 230 aa14.24□□□□□ -0.13
SQSTM1-209ENST00000504627 S1PR3Q99500 378 aa14.24□□□□□ -0.13
SQSTM1-209ENST00000504627 FAM212BQ9NTI7 297 aaPredicted RBP14.24□□□□□ -0.13
SQSTM1-209ENST00000504627 HMX3A6NHT5 357 aa14.23□□□□□ -0.13
SQSTM1-209ENST00000504627 M0R1X1 148 aa14.23□□□□□ -0.13
SQSTM1-209ENST00000504627 UCP1P25874 307 aa14.23□□□□□ -0.13
SQSTM1-209ENST00000504627 TMEM187Q14656 261 aa14.23□□□□□ -0.13
SQSTM1-209ENST00000504627 ZNF329Q86UD4 541 aa14.23□□□□□ -0.13
SQSTM1-209ENST00000504627 WFDC9Q8NEX5 89 aa14.23□□□□□ -0.13
SQSTM1-209ENST00000504627 OR51H1Q8NH63 302 aa14.23□□□□□ -0.13
SQSTM1-209ENST00000504627 MRAPQ8TCY5 172 aa14.23□□□□□ -0.13
SQSTM1-209ENST00000504627 ZNF251Q9BRH9 671 aa14.23□□□□□ -0.13
SQSTM1-209ENST00000504627 TMEM222Q9H0R3 208 aa14.23□□□□□ -0.13
SQSTM1-209ENST00000504627 SULT1A3P0DMM9 295 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 SULT1A4P0DMN0 295 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 DUTP33316 252 aaKnown RBP14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 KIR2DS2P43631 304 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 THBS3P49746 956 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 SLC35B1P78383 322 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 RPL39P5Q59GN2 51 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 SLC35E3Q7Z769 313 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 FOXRED2Q8IWF2 684 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 LRTM2Q8N967 370 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 OR2T10Q8NGZ9 312 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 EAF1Q96JC9 268 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 NOL4LQ96MY1 436 aaPredicted RBP14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 TP53RKQ96S44 253 aa14.22□□□□□ -0.13
SQSTM1-209ENST00000504627 PROP1O75360 226 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 EBI3Q14213 229 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 FCN2Q15485 313 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 ANKRD55Q3KP44 614 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 TGIF2LXQ8IUE1 241 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 LGI3Q8N145 548 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 CD300LFQ8TDQ1 290 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 GLYATL2Q8WU03 294 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 TCTEX1D2Q8WW35 142 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 IL22RA2Q969J5 263 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 ST6GALNAC6Q969X2 333 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 GPHA2Q96T91 129 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 LINC00527Q9UJ94 153 aa14.21□□□□□ -0.13
SQSTM1-209ENST00000504627 DUXBA0A1W2PPF3 345 aa14.2□□□□□ -0.14
SQSTM1-209ENST00000504627 DBX1A6NMT0 343 aa14.2□□□□□ -0.14
SQSTM1-209ENST00000504627 RBFOX2O43251 390 aaKnown RBP eCLIP14.2□□□□□ -0.146e-19■□□□□ 9.3
SQSTM1-209ENST00000504627 TXNL1O43396 289 aa14.2□□□□□ -0.14
SQSTM1-209ENST00000504627 RPA2P15927 270 aa14.2□□□□□ -0.14
SQSTM1-209ENST00000504627 CD1BP29016 333 aa14.2□□□□□ -0.14
SQSTM1-209ENST00000504627 TMEM56Q96MV1 263 aa14.2□□□□□ -0.14
SQSTM1-209ENST00000504627 MGAT4CQ9UBM8 478 aa14.2□□□□□ -0.14
SQSTM1-209ENST00000504627 PRELID3BQ9Y3B1 194 aa14.2□□□□□ -0.14
SQSTM1-209ENST00000504627 TMEM56-RWDD3S4R434 201 aa14.2□□□□□ -0.14
SQSTM1-209ENST00000504627 LINC00473A8K010 186 aa14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 MOSP00540 346 aa14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 IGHG2P01859 326 aa14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 SERPINE2P07093 398 aa14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 RPL30P62888 115 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 SP6Q3SY56 376 aa14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 AKAP14Q86UN6 197 aa14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 OR11H7Q8NGC8 314 aa14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 OR5M8Q8NGP6 311 aa14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 DDB2Q92466 427 aa14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 RBPMSQ93062 196 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 RCC1LQ96I51 464 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 RASL11BQ9BPW5 248 aa14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 AURKAIP1Q9NWT8 199 aaPredicted RBP14.19□□□□□ -0.14
SQSTM1-209ENST00000504627 NUDT19A8MXV4 375 aa14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 CDS2O95674 445 aa14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 HLA-GP17693 338 aa14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 RPL23AP62750 156 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 TAGLNQ01995 201 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 SPAG16Q8N0X2 631 aa14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 STPG2Q8N412 459 aa14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 UXS1Q8NBZ7 420 aa14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 ASB13Q8WXK3 278 aa14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 MRPL20Q9BYC9 149 aaKnown RBP14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 PRR13Q9NZ81 148 aa14.18□□□□□ -0.14
SQSTM1-209ENST00000504627 AP4M1O00189 453 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 GOSR2O14653 212 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 TMEM268Q5VZI3 342 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 LIN54Q6MZP7 749 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 ZNF695Q8IW36 515 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 COMMD1Q8N668 190 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 Q8N6K4 173 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 Q8N9W7 124 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 ZNF383Q8NA42 475 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 OR8H1Q8NGG4 311 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 OR4S2Q8NH73 311 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 LHFPL5Q8TAF8 219 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 GON7Q9BXV9 100 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 ZFP57Q9NU63 452 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 COMMD9Q9P000 198 aa14.17□□□□□ -0.14
SQSTM1-209ENST00000504627 LINC01548A6NM66 108 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 PFDN1O60925 122 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 ATG12O94817 140 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 APOA2P02652 100 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 CT45A6P0DMU7 189 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 CT45A5P0DMU8 189 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 CT45A7P0DMV0 189 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 RRASP10301 218 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms