RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 SNU13P55769 128 aaKnown RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 UBE2G2P60604 165 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 LCN6P62502 163 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 ARF1P84077 181 aaKnown RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 RELBQ01201 579 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 RPL18Q07020 188 aaKnown RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 ARFRP1Q13795 201 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 ENDOGQ14249 297 aaKnown RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 PDCD1Q15116 288 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 CEACAM16Q2WEN9 425 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 ABCA11PQ4W5N1 156 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 ARSJQ5FYB0 599 aaPredicted RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 SAMD5Q5TGI4 173 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 BRD3OSQ6XYD6 125 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 UEVLDQ8IX04 471 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 CMTM1Q8IZ96 169 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 PNKDQ8N490 385 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 CYB561D1Q8N8Q1 229 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 NUP37Q8NFH4 326 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 OR51G1Q8NGK1 321 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 OR13G1Q8NGZ3 307 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 OR10AC1Q8NH08 325 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 CCL17Q92583 94 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 TIMD4Q96H15 378 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 TSPAN32Q96QS1 320 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 ABHD6Q9BV23 337 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 VAMP8Q9BV40 100 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 EMC6Q9BV81 110 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 OR2J1Q9GZK6 312 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 MAGT1Q9H0U3 335 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 OR51I2Q9H344 312 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 CNTD2Q9H8S5 307 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 HSPB7Q9UBY9 170 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 UQCR10Q9UDW1 63 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 SLC45A2Q9UMX9 530 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 B9D1Q9UPM9 204 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 SLC22A13Q9Y226 551 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 MRPS28Q9Y2Q9 187 aaKnown RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 LSM5Q9Y4Y9 91 aaKnown RBP4.28□□□□□ -1.72
HTT-202ENST00000502820 PRR14LQ5THK1 2151 aa4.28□□□□□ -1.72
HTT-202ENST00000502820 IGHV2OR16-5A0A0B4J2B6 119 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 NKX6-3A6NJ46 265 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 FOXI3A8MTJ6 420 aaPredicted RBP4.27□□□□□ -1.73
HTT-202ENST00000502820 J3QR06 171 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 K7ERU9 68 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 TOX4O94842 621 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 MT-ND6P03923 174 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 H2BFMP0C1H6 154 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 PGA4P0DJD7 388 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 PGA5P0DJD9 388 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 ZNF728P0DKX0 622 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 GNB3P16520 340 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 GATA3P23771 443 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 NKX2-1P43699 371 aaPredicted RBP4.27□□□□□ -1.73
HTT-202ENST00000502820 GALR1P47211 349 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 THBS3P49746 956 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 RAB11AP62491 216 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 RBX1P62877 108 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 GNB2P62879 340 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 HBG1P69891 147 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 HBG2P69892 147 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 POU3F1Q03052 451 aaPredicted RBP4.27□□□□□ -1.73
HTT-202ENST00000502820 COL10A1Q03692 680 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 UBE2V1Q13404 147 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 TMEM187Q14656 261 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 HIST3H3Q16695 136 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 DEFB112Q30KQ8 113 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 BSXQ3C1V8 233 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 NSUN5P1Q3KNT7 163 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 TMEM41BQ5BJD5 291 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 KLF17Q5JT82 389 aaPredicted RBP4.27□□□□□ -1.73
HTT-202ENST00000502820 CARD17Q5XLA6 110 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 CDPF1Q6NVV7 123 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 ZNF66Q6ZN08 573 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 Q6ZS49 121 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 MDP1Q86V88 176 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 LRP11Q86VZ4 500 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 COMMD2Q86X83 199 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 C10orf53Q8N6V4 93 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 GVQW1Q8N7I0 195 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 TCTEX1D1Q8N7M0 179 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 ZNF738Q8NE65 137 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 OR2T10Q8NGZ9 312 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 RAB1CQ92928 201 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 TMEM54Q969K7 222 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 ERGIC1Q969X5 290 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 PPP1R14AQ96A00 147 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 SPSB1Q96BD6 273 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 TSSK2Q96PF2 358 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 MS4A10Q96PG2 267 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 RAB40CQ96S21 281 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 RNF2Q99496 336 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 NICN1Q9BSH3 213 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 MRPL13Q9BYD1 178 aaKnown RBP4.27□□□□□ -1.73
HTT-202ENST00000502820 C11orf1Q9H5F2 150 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 ZNF442Q9H7R0 627 aa4.27□□□□□ -1.73
HTT-202ENST00000502820 SRA1Q9HD15 236 aaKnown RBP4.27□□□□□ -1.73
HTT-202ENST00000502820 TMEM106BQ9NUM4 274 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms