RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 TEX38Q6PEX7 206 aa12.21□□□□□ -0.45
CPNE1-228ENST00000498814 SSX9Q7RTT3 188 aa12.21□□□□□ -0.45
CPNE1-228ENST00000498814 MMD2Q8IY49 270 aa12.21□□□□□ -0.45
CPNE1-228ENST00000498814 CADM3Q8N126 398 aa12.21□□□□□ -0.45
CPNE1-228ENST00000498814 OR4A5Q8NH83 315 aa12.21□□□□□ -0.45
CPNE1-228ENST00000498814 ABHD5Q8WTS1 349 aa12.21□□□□□ -0.45
CPNE1-228ENST00000498814 R3HDM4Q96D70 268 aa12.21□□□□□ -0.45
CPNE1-228ENST00000498814 CITED2Q99967 270 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-228ENST00000498814 C5orf66Q9H5L9 145 aa12.21□□□□□ -0.45
CPNE1-228ENST00000498814 ZNF430Q9H8G1 570 aaPredicted RBP12.21□□□□□ -0.45
CPNE1-228ENST00000498814 BET1LQ9NYM9 111 aa12.21□□□□□ -0.45
CPNE1-228ENST00000498814 WSB1Q9Y6I7 421 aa12.21□□□□□ -0.45
CPNE1-228ENST00000498814 H0Y980 276 aa12.2□□□□□ -0.46
CPNE1-228ENST00000498814 OPN1MWP04001 364 aa12.2□□□□□ -0.46
CPNE1-228ENST00000498814 IL6RP08887 468 aaPredicted RBP12.2□□□□□ -0.46
CPNE1-228ENST00000498814 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
CPNE1-228ENST00000498814 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
CPNE1-228ENST00000498814 FOXE3Q13461 319 aa12.2□□□□□ -0.46
CPNE1-228ENST00000498814 NDUFA11Q86Y39 141 aa12.2□□□□□ -0.46
CPNE1-228ENST00000498814 RNF152Q8N8N0 203 aa12.2□□□□□ -0.46
CPNE1-228ENST00000498814 MINDY2Q8NBR6 621 aa12.2□□□□□ -0.46
CPNE1-228ENST00000498814 FAM103A1Q9BTL3 118 aaKnown RBP12.2□□□□□ -0.46
CPNE1-228ENST00000498814 C3orf85A0A1B0GTC6 90 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 TCRBV4S1A1TA0A5B7 111 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 NAP1L6A6NFF2 107 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 MARCH11A6NNE9 402 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 M0QZ24 198 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 B3GALNT1O75752 331 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 ACTL6BO94805 426 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 IGLV1-40P01703 118 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 ELANEP08246 267 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 MAS1LP35410 378 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 ERVK-16P61578 105 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 TNXAQ16473 311 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 ECSCRQ19T08 205 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 HIST2H2BDQ6DRA6 164 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 LFNGQ8NES3 379 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 DMBX1Q8NFW5 382 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 GRPEL2Q8TAA5 225 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 TMEM68Q96MH6 324 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 TP53RKQ96S44 253 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 SLC25A21Q9BQT8 299 aaPredicted RBP12.19□□□□□ -0.46
CPNE1-228ENST00000498814 CCDC32Q9BV29 185 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 TMEM140Q9NV12 185 aa12.19□□□□□ -0.46
CPNE1-228ENST00000498814 TSSC4Q9Y5U2 329 aaPredicted RBP12.19□□□□□ -0.46
CPNE1-228ENST00000498814 WNK1Q9H4A3 2382 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 ADARB2-AS1A8MUL3 147 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 UPK2O00526 184 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 KRASP01116 189 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 SERPINE2P07093 398 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 FGF2P09038 288 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 RPA2P15927 270 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 PSMB8P28062 276 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 CD40LGP29965 261 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 RPL8P62917 257 aaKnown RBP12.18□□□□□ -0.46
CPNE1-228ENST00000498814 C2orf68Q2NKX9 166 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 UNQ5815/PRO19632Q6UWF5 114 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 SRSF12Q8WXF0 261 aaKnown RBP12.18□□□□□ -0.46
CPNE1-228ENST00000498814 C7orf50Q9BRJ6 194 aaKnown RBP12.18□□□□□ -0.46
CPNE1-228ENST00000498814 ZFP57Q9NU63 452 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 FOXA2Q9Y261 457 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-228ENST00000498814 VSIG4Q9Y279 399 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 VWFP04275 2813 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 PKD1L1Q8TDX9 2849 aa12.18□□□□□ -0.46
CPNE1-228ENST00000498814 TEX13DA0A0J9YY54 714 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-228ENST00000498814 MSGN1A6NI15 193 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 CRYM-AS1A6NIL9 109 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 IGKV1-39P01597 117 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 IGKV1D-39P04432 117 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 HLA-GP17693 338 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 UCP1P25874 307 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 G6PCP35575 357 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 CXorf66Q5JRM2 361 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-228ENST00000498814 OR5M8Q8NGP6 311 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 SEC22AQ96IW7 307 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 NAA60Q9H7X0 242 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 TRRAPQ9Y4A5 3859 aa12.17□□□□□ -0.46
CPNE1-228ENST00000498814 TRAV3A0A0B4J244 114 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 A0A1W2PN81 502 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 CENPXA8MT69 81 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 SOX15O60248 233 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 CHRNA7P36544 502 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 ZNF846Q147U1 533 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 SP6Q3SY56 376 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 PRR31Q5SQ13 230 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 C10orf55Q5SWW7 151 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 ASPHD1Q5U4P2 390 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 SGPP2Q8IWX5 399 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 ADAD2Q8NCV1 583 aaKnown RBP12.16□□□□□ -0.46
CPNE1-228ENST00000498814 TMEM230Q96A57 120 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 SPIN2AQ99865 258 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 SPIN2BQ9BPZ2 258 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 WDR12Q9GZL7 423 aaKnown RBP12.16□□□□□ -0.46
CPNE1-228ENST00000498814 TMEM222Q9H0R3 208 aa12.16□□□□□ -0.46
CPNE1-228ENST00000498814 LINC00854A0A1B0GVQ3 168 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 ATG12O94817 140 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 RPLP1P05386 114 aaKnown RBP12.15□□□□□ -0.46
CPNE1-228ENST00000498814 OR5AC1P0C628 307 aa12.15□□□□□ -0.46
CPNE1-228ENST00000498814 PF4V1P10720 104 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms