RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 SNX12Q9UMY4 172 aa2.85□□□□□ -1.95
CSTF1-207ENST00000498689 TMEM5Q9Y2B1 443 aa2.85□□□□□ -1.95
CSTF1-207ENST00000498689 GOLT1BQ9Y3E0 138 aa2.85□□□□□ -1.95
CSTF1-207ENST00000498689 GMEB1Q9Y692 573 aa2.85□□□□□ -1.95
CSTF1-207ENST00000498689 V9GYQ6 96 aa2.85□□□□□ -1.95
CSTF1-207ENST00000498689 V9GYY5 206 aaPredicted RBP2.85□□□□□ -1.95
CSTF1-207ENST00000498689 TRAV14DV4A0A0A6YYC5 116 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 TRAV5A0A0B4J249 113 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 TRBV4-1A0A0J9YWV2 114 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 H3BNG1 76 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 KRTAP1-4P0C5Y4 121 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 KCNJ3P48549 501 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 ROM1Q03395 351 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 ZNF79Q15937 498 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 GLT8D1Q68CQ7 371 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 ZNF600Q6ZNG1 722 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 RRM2BQ7LG56 351 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 SHFQ7M4L6 423 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 VTCN1Q7Z7D3 282 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 PDPNQ86YL7 162 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 PQLC1Q8N2U9 271 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 OR2AK2Q8NG84 335 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 OR10K1Q8NGX5 313 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 DGCR14Q96DF8 476 aaKnown RBP2.84□□□□□ -1.95
CSTF1-207ENST00000498689 TPD52L3Q96J77 140 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 OR10C1Q96KK4 312 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 ROPN1BQ9BZX4 212 aaPredicted RBP2.84□□□□□ -1.95
CSTF1-207ENST00000498689 VSIRQ9H7M9 311 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 TAF9BQ9HBM6 251 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 BAG5Q9UL15 447 aa2.84□□□□□ -1.95
CSTF1-207ENST00000498689 TEX13DA0A0J9YY54 714 aaPredicted RBP2.83□□□□□ -1.96
CSTF1-207ENST00000498689 FAM231BA6NCW3 169 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 DHRS7CA6NNS2 312 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 EVPLLA8MZ36 301 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 IBA57-AS1B1ANH7 110 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 M0R2T5 61 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 RAB29O14966 203 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 YPEL1O60688 119 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 SULT1C4O75897 302 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 MAS1P04201 325 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 HLA-DRB4P13762 266 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 GZMMP51124 257 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 CNBPP62633 177 aaKnown RBP2.83□□□□□ -1.96
CSTF1-207ENST00000498689 FFAR4Q5NUL3 377 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 ZNF322Q6U7Q0 402 aaPredicted RBP2.83□□□□□ -1.96
CSTF1-207ENST00000498689 DLEU7Q6UYE1 221 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 SLC25A42Q86VD7 318 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 SLC15A3Q8IY34 581 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 ELMOD2Q8IZ81 293 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 ADAT3Q96EY9 351 aaPredicted RBP2.83□□□□□ -1.96
CSTF1-207ENST00000498689 BSCL2Q96G97 398 aaPredicted RBP2.83□□□□□ -1.96
CSTF1-207ENST00000498689 CXorf58Q96LI9 332 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 YPEL2Q96QA6 119 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 SPIN2AQ99865 258 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 SPIN2BQ9BPZ2 258 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 NEK6Q9HC98 313 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 NOP10Q9NPE3 64 aaKnown RBP2.83□□□□□ -1.96
CSTF1-207ENST00000498689 PIPOXQ9P0Z9 390 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 PFDN2Q9UHV9 154 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 TRAPPC2LQ9UL33 140 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 HLA-DRB4X5D2U9 266 aa2.83□□□□□ -1.96
CSTF1-207ENST00000498689 A0A1W2PQL4 384 aaPredicted RBP2.82□□□□□ -1.96
CSTF1-207ENST00000498689 DPPA5A6NC42 116 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 HELTA6NFD8 242 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 K7EP13 123 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 COPEO14579 308 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 OGG1O15527 345 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 SPAG7O75391 227 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 YIF1AO95070 293 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 CST1P01037 141 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 CTSGP08311 255 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 KITP10721 976 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 MGMTP16455 207 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 ATF1P18846 271 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 CCL1P22362 96 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 PTBP1P26599 531 aaKnown RBP eCLIP2.82□□□□□ -1.96
CSTF1-207ENST00000498689 NKX2-1P43699 371 aaPredicted RBP2.82□□□□□ -1.96
CSTF1-207ENST00000498689 CAV1Q03135 178 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 FOXI1Q12951 378 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 UNC119Q13432 240 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 MICAQ29983 383 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 CYBRD1Q53TN4 286 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 BCL2L15Q5TBC7 163 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 SPSB3Q6PJ21 355 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 FUNDC1Q8IVP5 155 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 THAP8Q8NA92 274 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 UBAC2Q8NBM4 344 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 OR8D4Q8NGM9 314 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 OR10A6Q8NH74 314 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 OPALINQ96PE5 141 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 AGMATQ9BSE5 352 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 TSPYL1Q9H0U9 437 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 PSORS1C2Q9UIG4 136 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 JPT1Q9UK76 154 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 OR52A1Q9UKL2 312 aa2.82□□□□□ -1.96
CSTF1-207ENST00000498689 RNF222A6NCQ9 220 aa2.81□□□□□ -1.96
CSTF1-207ENST00000498689 GEMIN2O14893 280 aaKnown RBP2.81□□□□□ -1.96
CSTF1-207ENST00000498689 ZNF324O75467 553 aaPredicted RBP2.81□□□□□ -1.96
CSTF1-207ENST00000498689 OR7C1O76099 320 aaPredicted RBP2.81□□□□□ -1.96
CSTF1-207ENST00000498689 TSPAN13O95857 204 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms