RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 KLF5Q13887 457 aaPredicted RBP12.33□□□□□ -0.44
NR1H3-227ENST00000498548 TTC9CQ8N5M4 171 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 OR6Q1Q8NGQ2 317 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 TMEM167AQ8TBQ9 72 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 USMG5Q96IX5 58 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 SPIN2AQ99865 258 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 SPIN2BQ9BPZ2 258 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 ELOVL1Q9BW60 279 aa12.33□□□□□ -0.44
NR1H3-227ENST00000498548 NAA50Q9GZZ1 169 aaKnown RBP12.33□□□□□ -0.44
NR1H3-227ENST00000498548 DPPA5A6NC42 116 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 CREBL2O60519 120 aaPredicted RBP12.32□□□□□ -0.44
NR1H3-227ENST00000498548 OR2J3O76001 311 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 RPA2P15927 270 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 PRSS3P35030 304 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 KIR2DS2P43631 304 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 HERV-K104P61576 105 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 ATP5G2Q06055 141 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 ZBTB34Q8NCN2 500 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 OR51H1Q8NH63 302 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 ZNF2Q9BSG1 426 aaPredicted RBP12.32□□□□□ -0.44
NR1H3-227ENST00000498548 ANAPC10Q9UM13 185 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 SMAD5-AS1Q9Y6J3 95 aa12.32□□□□□ -0.44
NR1H3-227ENST00000498548 TRAV3A0A0B4J244 114 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 HPGDSO60760 199 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 HRASP01112 189 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 SMIM18P0DKX4 95 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 GNRHRP30968 328 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 EXOSC2Q13868 293 aaKnown RBP12.31□□□□□ -0.44
NR1H3-227ENST00000498548 MSMO1Q15800 293 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 OR4A47Q6IF82 309 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 IL34Q6ZMJ4 242 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 ANKRD13BQ86YJ7 626 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 LYSMD2Q8IV50 215 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 OR5H2Q8NGV7 314 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 VSTM2AQ8TAG5 236 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 HUWE1Q7Z6Z7 4374 aaKnown RBP12.31□□□□□ -0.44
NR1H3-227ENST00000498548 COL7A1Q02388 2944 aa12.31□□□□□ -0.44
NR1H3-227ENST00000498548 TRBV9A0A0B4J1U6 114 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 CGB1A6NKQ9 187 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 IGHV3-23P01764 117 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 REG1AP05451 166 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 ZNF735P0CB33 412 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 AREGP15514 252 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 NAT1P18440 290 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 HLA-DMAP28067 261 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 CATR1Q13166 79 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 RPEL1Q2QD12 228 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 AADACL3Q5VUY0 350 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 DHRS11Q6UWP2 260 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 SNX29P2Q8IUI4 249 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 OR9G4Q8NGQ1 327 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
NR1H3-227ENST00000498548 HRASLSQ9HDD0 168 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 S4R3C0 116 aa12.3□□□□□ -0.44
NR1H3-227ENST00000498548 FAM223BA6NKX1 122 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 BMPR1BO00238 502 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 S1PR2O95136 353 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 NDUFB8O95169 186 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 IGLV1-51P01701 117 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 NHLRC4P0CG21 123 aaPredicted RBP12.29□□□□□ -0.44
NR1H3-227ENST00000498548 HLA-GP17693 338 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 ELK1P19419 428 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 MAS1LP35410 378 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 RPL8P62917 257 aaKnown RBP12.29□□□□□ -0.44
NR1H3-227ENST00000498548 SLC25A42Q86VD7 318 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 FAM223AQ8IWN6 122 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 FXYD6Q9H0Q3 95 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 SLC2A9Q9NRM0 540 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 BET1LQ9NYM9 111 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 FBXL7Q9UJT9 491 aa12.29□□□□□ -0.44
NR1H3-227ENST00000498548 SMIM31A0A1B0GVY4 71 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 PPP5D1E7EU14 171 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 PGLYRP1O75594 196 aaPredicted RBP12.28□□□□□ -0.44
NR1H3-227ENST00000498548 HPRT1P00492 218 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 CSN3P07498 182 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 HRH1P35367 487 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 TATDN3Q17R31 274 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 C15orf32Q32M92 178 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 RNASE12Q5GAN4 147 aaKnown RBP12.28□□□□□ -0.44
NR1H3-227ENST00000498548 GPR107Q5VW38 600 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 SBSPONQ8IVN8 264 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 NECAP1Q8NC96 275 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 GPX8Q8TED1 209 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 MOB3AQ96BX8 217 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 FANCD2OSQ96PS1 177 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 MRPS26Q9BYN8 205 aaKnown RBP12.28□□□□□ -0.44
NR1H3-227ENST00000498548 ZNF257Q9Y2Q1 563 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 U3KQK5 164 aa12.28□□□□□ -0.44
NR1H3-227ENST00000498548 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.27□□□□□ -0.45
NR1H3-227ENST00000498548 NPIPB5A8MRT5 1133 aa12.27□□□□□ -0.45
NR1H3-227ENST00000498548 FAM25AB3EWG3 89 aa12.27□□□□□ -0.45
NR1H3-227ENST00000498548 FAM25CB3EWG5 89 aa12.27□□□□□ -0.45
NR1H3-227ENST00000498548 FAM25GB3EWG6 89 aa12.27□□□□□ -0.45
NR1H3-227ENST00000498548 UPK2O00526 184 aa12.27□□□□□ -0.45
NR1H3-227ENST00000498548 RBFOX2O43251 390 aaKnown RBP eCLIP12.27□□□□□ -0.45
NR1H3-227ENST00000498548 HLA-AP01891 365 aaKnown RBP12.27□□□□□ -0.45
NR1H3-227ENST00000498548 APOA1P02647 267 aa12.27□□□□□ -0.45
NR1H3-227ENST00000498548 RLN1P04808 185 aa12.27□□□□□ -0.45
NR1H3-227ENST00000498548 NQO2P16083 231 aa12.27□□□□□ -0.45
NR1H3-227ENST00000498548 PSMB6P28072 239 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms