RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 TP53BP1Q12888 1972 aaPredicted RBP5.56□□□□□ -1.52
SNX13-212ENST00000498463 LRP6O75581 1613 aa5.56□□□□□ -1.52
SNX13-212ENST00000498463 COL1A2P08123 1366 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 UPK1AO00322 258 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 SIX6O95475 246 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 IGLV2-8P01709 118 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 CXCL2P19875 107 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 BRS3P32247 399 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 MAXP61244 160 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 SNRPFP62306 86 aaKnown RBP5.55□□□□□ -1.52
SNX13-212ENST00000498463 HOXC5Q00444 222 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 PRDX1Q06830 199 aaKnown RBP5.55□□□□□ -1.52
SNX13-212ENST00000498463 MLLT11Q13015 90 aaPredicted RBP5.55□□□□□ -1.52
SNX13-212ENST00000498463 HTR4Q13639 388 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 MORN2Q502X0 79 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 OCIAD2Q56VL3 154 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 LAIR2Q6ISS4 152 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 HIST3H2BBQ8N257 126 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 TOMM5Q8N4H5 51 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 SYNPRQ8TBG9 265 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 EEF1AKMT1Q8WVE0 214 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 RNF133Q8WVZ7 376 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 MRPL57Q9BQC6 102 aaKnown RBP5.55□□□□□ -1.52
SNX13-212ENST00000498463 MIEN1Q9BRT3 115 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 C1QTNF6Q9BXI9 259 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 WFDC1Q9HC57 220 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 TET3O43151 1660 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 TOPAZ1Q8N9V7 1692 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 PHIPQ8WWQ0 1821 aa5.55□□□□□ -1.52
SNX13-212ENST00000498463 TET2Q6N021 2002 aaPredicted RBP5.55□□□□□ -1.52
SNX13-212ENST00000498463 MICAL3Q7RTP6 2002 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 SOCS1O15524 211 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 ENTPD6O75354 484 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 SRSF10O75494 262 aaKnown RBP5.54□□□□□ -1.52
SNX13-212ENST00000498463 YIF1AO95070 293 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 MT-CO2P00403 227 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 PMP2P02689 132 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 OR10J1P30954 320 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 GRB2P62993 217 aaKnown RBP5.54□□□□□ -1.52
SNX13-212ENST00000498463 EBPQ15125 230 aaKnown RBP5.54□□□□□ -1.52
SNX13-212ENST00000498463 FAM78AQ5JUQ0 283 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 TBPL2Q6SJ96 375 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 SMARCD3Q6STE5 483 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 ZNF664Q8N3J9 261 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 KCNRGQ8N5I3 272 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 OR9I1Q8NGQ6 314 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 OR13C4Q8NGS5 318 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 SKA2Q8WVK7 121 aaPredicted RBP5.54□□□□□ -1.52
SNX13-212ENST00000498463 ZNF414Q96IQ9 312 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 ZNF649Q9BS31 505 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 FAAP24Q9BTP7 215 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 TLNRD1Q9H1K6 362 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 PLEKHF2Q9H8W4 249 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 NDUFB11Q9NX14 153 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 CCDC167Q9P0B6 97 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 DOK5Q9P104 306 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 VPS29Q9UBQ0 182 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 KIF25-AS1Q9Y6Z4 181 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 CICQ96RK0 1608 aaPredicted RBP5.54□□□□□ -1.52
SNX13-212ENST00000498463 TOGARAM1Q9Y4F4 1720 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 FLT4P35916 1363 aa5.54□□□□□ -1.52
SNX13-212ENST00000498463 DOCK2Q92608 1830 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 GTF3C1Q12789 2109 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 IGLV3-10A0A075B6K4 115 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 A0A087WWC5 75 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 ARL5CA6NH57 179 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 G3V3Q6 166 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 SLC17A3O00476 420 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 ANGPTL7O43827 346 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 CDRT1O95170 752 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 CD79AP11912 226 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 TPT1P13693 172 aaKnown RBP5.53□□□□□ -1.52
SNX13-212ENST00000498463 IL3RAP26951 378 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 S100GP29377 79 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 GRPRP30550 384 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 FAUP35544 74 aaKnown RBP5.53□□□□□ -1.52
SNX13-212ENST00000498463 SNCAP37840 140 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 HBG1P69891 147 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 HBG2P69892 147 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 ZNF235Q14590 738 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 TBC1D28Q2M2D7 210 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 SLC25A35Q3KQZ1 300 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 COX19Q49B96 90 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 TMEM144Q7Z5S9 345 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 OR1L1Q8NH94 360 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 FMC1Q96HJ9 113 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 REEP6Q96HR9 211 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 BTF3L4Q96K17 158 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 OR7D2Q96RA2 312 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 MRPL20Q9BYC9 149 aaKnown RBP5.53□□□□□ -1.52
SNX13-212ENST00000498463 OR2J1Q9GZK6 312 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 TAS2R5Q9NYW4 299 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 COMMD9Q9P000 198 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 ZNF230Q9UIE0 474 aaPredicted RBP5.53□□□□□ -1.52
SNX13-212ENST00000498463 FARSAQ9Y285 508 aaKnown RBP5.53□□□□□ -1.52
SNX13-212ENST00000498463 TBL2Q9Y4P3 447 aaKnown RBP5.53□□□□□ -1.52
SNX13-212ENST00000498463 TIAM2Q8IVF5 1701 aa5.53□□□□□ -1.52
SNX13-212ENST00000498463 LRRC37A3O60309 1634 aa5.52□□□□□ -1.53
SNX13-212ENST00000498463 PXDNQ92626 1479 aa5.52□□□□□ -1.53
SNX13-212ENST00000498463 CEACAM18A8MTB9 384 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms