RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 DSCAML1Q8TD84 2053 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 LOC105371242A0A075B767 164 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 SAA2-SAA4A0A096LPE2 208 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 PPIAL4CA0A0B4J2A2 164 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 A0A1W2PPE3 182 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 DUXBA0A1W2PPF3 345 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 RNF212BA8MTL3 300 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 J3QR06 171 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 M0R1W7 72 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 RBFOX2O43251 390 aaKnown RBP eCLIP4.3□□□□□ -1.72
GGPS1-208ENST00000497327 PITX3O75364 302 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 IGLV1-47P01700 117 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 IGHV3-7P01780 117 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 HOXB5P09067 269 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 SAA2P0DJI9 122 aaPredicted RBP4.3□□□□□ -1.72
GGPS1-208ENST00000497327 PPIAL4GP0DN37 164 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 SLC25A4P12235 298 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 LYL1P12980 280 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 DNASE1P24855 282 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 NFYBP25208 207 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 S100GP29377 79 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 SSTR2P30874 369 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 DUTP33316 252 aaKnown RBP4.3□□□□□ -1.72
GGPS1-208ENST00000497327 GPR12P47775 334 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 RAB7AP51149 207 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 ZNF137PP52743 207 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 NKX2-5P52952 324 aaPredicted RBP4.3□□□□□ -1.72
GGPS1-208ENST00000497327 ATP5J2P56134 94 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 ERVFC1-1P60608 527 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 GNB2P62879 340 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 SRPXP78539 464 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 IZUMO4Q1ZYL8 232 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 RPL39P5Q59GN2 51 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 NCR3LG1Q68D85 454 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 C11orf88Q6PI97 169 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 ZNF833PQ6ZTB9 187 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 C16orf82Q7Z2V1 217 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 C9orf62Q8N4C0 152 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 KIR3DL3Q8N743 410 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 TCTEX1D1Q8N7M0 179 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 Q8N7P7 452 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 SLC35G3Q8N808 338 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 OR2T35Q8NGX2 323 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 OR51H1Q8NH63 302 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 CLDND2Q8NHS1 167 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 TNFRSF14Q92956 283 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 RBPMSQ93062 196 aaKnown RBP4.3□□□□□ -1.72
GGPS1-208ENST00000497327 C2orf50Q96LR7 162 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 HYLS1Q96M11 299 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 HSD17B10Q99714 261 aaKnown RBP4.3□□□□□ -1.72
GGPS1-208ENST00000497327 RNF126Q9BV68 326 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 CHIAQ9BZP6 476 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 NMES1Q9C002 83 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 TMEM133Q9H2Q1 129 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 RANBP3Q9H6Z4 567 aaPredicted RBP4.3□□□□□ -1.72
GGPS1-208ENST00000497327 KCNS2Q9ULS6 477 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 TMED3Q9Y3Q3 217 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 RBM7Q9Y580 266 aaKnown RBP4.3□□□□□ -1.72
GGPS1-208ENST00000497327 ARID1AO14497 2285 aa4.3□□□□□ -1.72
GGPS1-208ENST00000497327 NAV2Q8IVL1 2488 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 IGHV4-30-2A0A087WSY4 118 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 A0A096LNT2 108 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 IGHV4-61A0A0C4DH41 118 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 A0A0G2JRQ6 117 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 C13orf42A0A1B0GVH6 325 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 A0A1W2PPH5 198 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 C5orf51A6NDU8 294 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 HMSDA8MTL9 139 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 LY6LH3BQJ8 138 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 M0R1X1 148 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 RAB29O14966 203 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 RAMP3O60896 148 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 IFNA21P01568 189 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 IGKV1-5P01602 117 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 SERPINE2P07093 398 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 LIPFP07098 398 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 CT45A6P0DMU7 189 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 CT45A5P0DMU8 189 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 CT45A7P0DMV0 189 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 SLC25A6P12236 298 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 MMP9P14780 707 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 RPA2P15927 270 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 VDAC1P21796 283 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 PRTN3P24158 256 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 PSMB6P28072 239 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 LPAR6P43657 344 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 CYCSP99999 105 aaKnown RBP4.29□□□□□ -1.72
GGPS1-208ENST00000497327 CATR1Q13166 79 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 KRTAP24-1Q3LI83 254 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 LGALSLQ3ZCW2 172 aaPredicted RBP4.29□□□□□ -1.72
GGPS1-208ENST00000497327 ESCO2Q56NI9 601 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 TMEM268Q5VZI3 342 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 HCP5Q6MZN7 132 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 FAM71F2Q6NXP2 309 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 BTNL3Q6UXE8 466 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 Q6ZSV7 163 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 ZNF695Q8IW36 515 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 SPAG16Q8N0X2 631 aa4.29□□□□□ -1.72
GGPS1-208ENST00000497327 LYG1Q8N1E2 194 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms