RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 HARBI1Q96MB7 349 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 NARFLQ9H6Q4 476 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 HEYLQ9NQ87 328 aaPredicted RBP12.85□□□□□ -0.35
RPN1-207ENST00000497289 BET1LQ9NYM9 111 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 C22orf46C9J442 243 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 UPK2O00526 184 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 C1QL1O75973 258 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 IL6RP08887 468 aaPredicted RBP12.85□□□□□ -0.35
RPN1-207ENST00000497289 VDAC2P45880 294 aaPredicted RBP12.85□□□□□ -0.35
RPN1-207ENST00000497289 RAB13P51153 203 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 HSPE1P61604 102 aaKnown RBP12.85□□□□□ -0.35
RPN1-207ENST00000497289 DIAPH2-AS1Q14236 149 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 HLA-DRB5Q30154 266 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 FAM213BQ8TBF2 198 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 FLYWCH2Q96CP2 140 aaKnown RBP12.85□□□□□ -0.35
RPN1-207ENST00000497289 TMEM147Q9BVK8 224 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 WASHC3Q9Y3C0 194 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 RFNGQ9Y644 331 aa12.85□□□□□ -0.35
RPN1-207ENST00000497289 UBE2L5PA0A1B0GUS4 154 aa12.84□□□□□ -0.35
RPN1-207ENST00000497289 C15orf62A8K5M9 175 aa12.84□□□□□ -0.35
RPN1-207ENST00000497289 TSPAN15O95858 294 aa12.84□□□□□ -0.35
RPN1-207ENST00000497289 SAA1P0DJI8 122 aaPredicted RBP12.84□□□□□ -0.35
RPN1-207ENST00000497289 AKR1C8PQ5T2L2 129 aa12.84□□□□□ -0.35
RPN1-207ENST00000497289 BEND2Q8NDZ0 799 aa12.84□□□□□ -0.35
RPN1-207ENST00000497289 BPIFCQ8NFQ6 507 aa12.84□□□□□ -0.35
RPN1-207ENST00000497289 OR4C13Q8NGP0 309 aa12.84□□□□□ -0.35
RPN1-207ENST00000497289 LHX4Q969G2 390 aa12.84□□□□□ -0.35
RPN1-207ENST00000497289 PSMG3Q9BT73 122 aaPredicted RBP12.84□□□□□ -0.35
RPN1-207ENST00000497289 WDR61Q9GZS3 305 aaKnown RBP12.84□□□□□ -0.35
RPN1-207ENST00000497289 AMMECR1Q9Y4X0 333 aaPredicted RBP12.84□□□□□ -0.35
RPN1-207ENST00000497289 SRRM4A7MD48 611 aaKnown RBP12.83□□□□□ -0.35
RPN1-207ENST00000497289 NDUFS7O75251 213 aa12.83□□□□□ -0.35
RPN1-207ENST00000497289 IFNA10P01566 189 aa12.83□□□□□ -0.35
RPN1-207ENST00000497289 IGLV1-47P01700 117 aa12.83□□□□□ -0.35
RPN1-207ENST00000497289 PRB1P04280 392 aa12.83□□□□□ -0.35
RPN1-207ENST00000497289 MC5RP33032 325 aa12.83□□□□□ -0.35
RPN1-207ENST00000497289 FHITP49789 147 aa12.83□□□□□ -0.35
RPN1-207ENST00000497289 DPPA3Q6W0C5 159 aa12.83□□□□□ -0.35
RPN1-207ENST00000497289 PUSL1Q8N0Z8 303 aaKnown RBP12.83□□□□□ -0.35
RPN1-207ENST00000497289 NARS2Q96I59 477 aaKnown RBP12.83□□□□□ -0.35
RPN1-207ENST00000497289 BBC3Q96PG8 261 aaPredicted RBP12.83□□□□□ -0.35
RPN1-207ENST00000497289 ENY2Q9NPA8 101 aa12.83□□□□□ -0.35
RPN1-207ENST00000497289 ZNF257Q9Y2Q1 563 aa12.83□□□□□ -0.35
RPN1-207ENST00000497289 OR51B2Q9Y5P1 312 aa12.83□□□□□ -0.35
RPN1-207ENST00000497289 LRBAP50851 2863 aa12.83□□□□□ -0.36
RPN1-207ENST00000497289 MALRD1Q5VYJ5 2156 aa12.83□□□□□ -0.36
RPN1-207ENST00000497289 LOC105371242A0A075B767 164 aa12.83□□□□□ -0.36
RPN1-207ENST00000497289 COMMD1Q8N668 190 aa12.83□□□□□ -0.36
RPN1-207ENST00000497289 RBMXL1Q96E39 390 aaKnown RBP12.83□□□□□ -0.36
RPN1-207ENST00000497289 UQCC1Q9NVA1 299 aa12.83□□□□□ -0.36
RPN1-207ENST00000497289 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
RPN1-207ENST00000497289 KBTBD11O94819 623 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 COX7A1P24310 79 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 TLE4Q04727 773 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 TAF15Q92804 592 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPN1-207ENST00000497289 RSG1Q9BU20 258 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 FBXO7Q9Y3I1 522 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 BUB1B-PAK6H3BSN5 160 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 M0R1W7 72 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 OVOL3O00110 214 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 DLX1P56177 255 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 RPS16P62249 146 aaKnown RBP12.82□□□□□ -0.36
RPN1-207ENST00000497289 VWC2Q2TAL6 325 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 OR4A5Q8NH83 315 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 VSTM2AQ8TAG5 236 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 TIMM9Q9Y5J7 89 aa12.82□□□□□ -0.36
RPN1-207ENST00000497289 KLF2Q9Y5W3 355 aaPredicted RBP12.82□□□□□ -0.36
RPN1-207ENST00000497289 RAB11AP62491 216 aa12.81□□□□□ -0.36
RPN1-207ENST00000497289 PRCDQ00LT1 54 aa12.81□□□□□ -0.36
RPN1-207ENST00000497289 AKR1C1Q04828 323 aa12.81□□□□□ -0.36
RPN1-207ENST00000497289 TUSC1Q2TAM9 212 aa12.81□□□□□ -0.36
RPN1-207ENST00000497289 LFNGQ8NES3 379 aa12.81□□□□□ -0.36
RPN1-207ENST00000497289 MS4A7Q9GZW8 240 aaPredicted RBP12.81□□□□□ -0.36
RPN1-207ENST00000497289 TREM1Q9NP99 234 aa12.81□□□□□ -0.36
RPN1-207ENST00000497289 TMA7Q9Y2S6 64 aaKnown RBP12.81□□□□□ -0.36
RPN1-207ENST00000497289 CACNA1BQ00975 2339 aa12.81□□□□□ -0.36
RPN1-207ENST00000497289 AGPAT2O15120 278 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 USF1P22415 310 aaPredicted RBP12.8□□□□□ -0.36
RPN1-207ENST00000497289 SERF2P84101 59 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 PNKDQ8N490 385 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 Q8N7P7 452 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 OR4P4Q8NGL7 312 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 PLEKHA3Q9HB20 300 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 TMEM218A2RU14 115 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 FGF7P21781 194 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 SNCAP37840 140 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 ARF6P62330 175 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 SRSF3P84103 164 aaKnown RBP12.8□□□□□ -0.36
RPN1-207ENST00000497289 PRB3Q04118 309 aaPredicted RBP12.8□□□□□ -0.36
RPN1-207ENST00000497289 ETV3LQ6ZN32 361 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 ZNF843Q8N446 348 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 SLC24A4Q8NFF2 622 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 TMEM167AQ8TBQ9 72 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 HINT2Q9BX68 163 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 TMEM231Q9H6L2 316 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 ZFYVE26Q68DK2 2539 aa12.8□□□□□ -0.36
RPN1-207ENST00000497289 IGHV2-5P01817 119 aa12.79□□□□□ -0.36
RPN1-207ENST00000497289 MYOD1P15172 320 aa12.79□□□□□ -0.36
RPN1-207ENST00000497289 VMA21Q3ZAQ7 101 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms