RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 HCP5Q6MZN7 132 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 OR4C13Q8NGP0 309 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 OR1S2Q8NGQ3 325 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 PSMG3-AS1Q96PY0 264 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 OR4C12Q96R67 309 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 BARX1Q9HBU1 254 aaPredicted RBP13.25□□□□□ -0.29
HLA-A-208ENST00000496081 MMP26Q9NRE1 261 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 FOXA2Q9Y261 457 aaPredicted RBP13.25□□□□□ -0.29
HLA-A-208ENST00000496081 MED13LQ71F56 2210 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 UPK2O00526 184 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 FGF16O43320 207 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 RAB13P51153 203 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 KLRD1Q13241 179 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 LDLRAD2Q5SZI1 272 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 PUSL1Q8N0Z8 303 aaKnown RBP13.25□□□□□ -0.29
HLA-A-208ENST00000496081 ATP5SQ99766 215 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 PIMREGQ9BSJ6 248 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 UNKLQ9H9P5 680 aaKnown RBP13.25□□□□□ -0.29
HLA-A-208ENST00000496081 BET1LQ9NYM9 111 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 NUP50Q9UKX7 468 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 TCF19Q9Y242 345 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 KPTNQ9Y664 436 aa13.25□□□□□ -0.29
HLA-A-208ENST00000496081 IGHV3-72A0A0B4J1Y9 119 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 IGHV1-3A0A0C4DH29 117 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 IGHV2-70DA0A0C4DH43 119 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 LEUTXA8MZ59 168 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 VWC2LB2RUY7 222 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 NDUFS8O00217 210 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 ARG1P05089 322 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 RPS16P62249 146 aaKnown RBP13.24□□□□□ -0.29
HLA-A-208ENST00000496081 HIST2H2BCQ6DN03 193 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 VMO1Q7Z5L0 202 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 STPG2Q8N412 459 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 HSD17B11Q8NBQ5 300 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 RNF141Q8WVD5 230 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 CITED4Q96RK1 184 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 MS4A7Q9GZW8 240 aaPredicted RBP13.24□□□□□ -0.29
HLA-A-208ENST00000496081 SIRPDQ9H106 197 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 CACFD1Q9UGQ2 172 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 STRAPQ9Y3F4 350 aaKnown RBP13.24□□□□□ -0.29
HLA-A-208ENST00000496081 INSIG2Q9Y5U4 225 aa13.24□□□□□ -0.29
HLA-A-208ENST00000496081 SEC11BP0C7V7 166 aa13.23□□□□□ -0.29
HLA-A-208ENST00000496081 SPP1P10451 314 aa13.23□□□□□ -0.29
HLA-A-208ENST00000496081 MYOD1P15172 320 aa13.23□□□□□ -0.29
HLA-A-208ENST00000496081 VDAC2P45880 294 aaPredicted RBP13.23□□□□□ -0.29
HLA-A-208ENST00000496081 HSPE1P61604 102 aaKnown RBP13.23□□□□□ -0.29
HLA-A-208ENST00000496081 CLEC2AQ6UVW9 174 aa13.23□□□□□ -0.29
HLA-A-208ENST00000496081 COMMD7Q86VX2 200 aa13.23□□□□□ -0.29
HLA-A-208ENST00000496081 RPEQ96AT9 228 aa13.23□□□□□ -0.29
HLA-A-208ENST00000496081 PERPQ96FX8 193 aa13.23□□□□□ -0.29
HLA-A-208ENST00000496081 PRNDQ9UKY0 176 aa13.23□□□□□ -0.29
HLA-A-208ENST00000496081 USP9YO00507 2555 aaPredicted RBP13.23□□□□□ -0.29
HLA-A-208ENST00000496081 ODF3BA8MYP8 253 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 FOXH1O75593 365 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 DFFBO76075 338 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 KBTBD11O94819 623 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 LY86O95711 162 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 IGLV2-23P01705 113 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 HTR1DP28221 377 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 HBG1P69891 147 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 HBG2P69892 147 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 MOB3BQ86TA1 216 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 LRRC20Q8TCA0 184 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 RITA1Q96K30 269 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 SH3BGRL3Q9H299 93 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 DPM3Q9P2X0 92 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 OR51B2Q9Y5P1 312 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 TNCP24821 2201 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 IGHV4-61A0A0C4DH41 118 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 PMS2P5A8MQ11 134 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 FAM157AC9JC47 383 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 PAX1P15863 534 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 TPTE2P1Q5T6R2 138 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 OR8G2PQ6IF36 304 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 MED9Q9NWA0 146 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 ZNF257Q9Y2Q1 563 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 WNK2Q9Y3S1 2297 aa13.22□□□□□ -0.29
HLA-A-208ENST00000496081 A0A1W2PPI3 338 aa13.21□□□□□ -0.29
HLA-A-208ENST00000496081 C15orf62A8K5M9 175 aa13.21□□□□□ -0.29
HLA-A-208ENST00000496081 RNASEK-C17orf49H0YIS7 233 aa13.21□□□□□ -0.29
HLA-A-208ENST00000496081 SULT1A2P50226 295 aa13.21□□□□□ -0.29
HLA-A-208ENST00000496081 TSNAXQ99598 290 aaKnown RBP13.21□□□□□ -0.29
HLA-A-208ENST00000496081 HIPK2Q9H2X6 1198 aa13.21□□□□□ -0.29
HLA-A-208ENST00000496081 HEYLQ9NQ87 328 aaPredicted RBP13.21□□□□□ -0.29
HLA-A-208ENST00000496081 POLR3KQ9Y2Y1 108 aaPredicted RBP13.21□□□□□ -0.29
HLA-A-208ENST00000496081 IGHV4-30-2A0A087WSY4 118 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 TEX50A0A1B0GTY4 177 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 TEX46H3BTG2 121 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 FGF2P09038 288 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 HOXB4P17483 251 aaPredicted RBP13.2□□□□□ -0.3
HLA-A-208ENST00000496081 ATP6V0CP27449 155 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 LGALS7P47929 136 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 HOXA1P49639 335 aaPredicted RBP13.2□□□□□ -0.3
HLA-A-208ENST00000496081 SLC38A11Q08AI6 406 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 LHFPL4Q7Z7J7 247 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 LILRB2Q8N423 598 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 VSTM2AQ8TAG5 236 aa13.2□□□□□ -0.3
HLA-A-208ENST00000496081 TMEM167AQ8TBQ9 72 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms