RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, human

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX17-209	ENST00000494893	NDUFA11	Q86Y39	141 aa		13.45	□□□□□ -0.26
SNX17-209	ENST00000494893	FOXRED2	Q8IWF2	684 aa		13.45	□□□□□ -0.26
SNX17-209	ENST00000494893	NAA60	Q9H7X0	242 aa		13.45	□□□□□ -0.26
SNX17-209	ENST00000494893	FBXO7	Q9Y3I1	522 aa		13.45	□□□□□ -0.26
SNX17-209	ENST00000494893	WNK1	Q9H4A3	2382 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	ATP6V0E1	O15342	81 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	SFT2D2	O95562	160 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	HLA-A	P01891	365 aa	Known RBP	13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	CRYGB	P07316	175 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	VAMP1	P23763	118 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	RPS16	P62249	146 aa	Known RBP	13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	SSBP2	P81877	361 aa	Predicted RBP	13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	DHRS2	Q13268	280 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	KCTD9	Q7L273	389 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	TBC1D26	Q86UD7	250 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	OR52B4	Q8NGK2	314 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	ZNF431	Q8TF32	576 aa	Predicted RBP	13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	FLYWCH2	Q96CP2	140 aa	Known RBP	13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	OR51J1	Q9H342	316 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	KIAA1456	Q9P272	454 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	METTL1	Q9UBP6	276 aa	Known RBP	13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	ZNF580	Q9UK33	172 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893	KCNIP3	Q9Y2W7	256 aa		13.44	□□□□□ -0.26
SNX17-209	ENST00000494893		A0A1W2PRX2	142 aa		13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	TNFSF12	O43508	249 aa		13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	CREBL2	O60519	120 aa	Predicted RBP	13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	SPDEF	O95238	335 aa		13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	EGR2	P11161	476 aa	Predicted RBP	13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	CBX3	Q13185	183 aa		13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	MRGPRG-AS1	Q2M3A8	158 aa		13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	C19orf54	Q5BKX5	351 aa		13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	CADM3	Q8N126	398 aa		13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	GALNT14	Q96FL9	552 aa		13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	ADTRP	Q96IZ2	230 aa		13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	TSNAX	Q99598	290 aa	Known RBP	13.43	□□□□□ -0.26
SNX17-209	ENST00000494893	TCRBV4S1A1T	A0A5B7	111 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893		G3V318	75 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	SLC25A17	O43808	307 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	DUS4L	O95620	317 aa	Known RBP	13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	PPIF	P30405	207 aa	Known RBP	13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	CX3CL1	P78423	397 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	TAGLN	Q01995	201 aa	Known RBP	13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	ZNF66	Q6ZN08	573 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	LCNL1	Q6ZST4	164 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	C18orf65	Q6ZTR6	163 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	OR4X2	Q8NGF9	303 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	HARBI1	Q96MB7	349 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	CLCC1	Q96S66	551 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	HSD17B10	Q99714	261 aa	Known RBP	13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	PARP11	Q9NR21	331 aa		13.42	□□□□□ -0.26
SNX17-209	ENST00000494893	MEGF8	Q7Z7M0	2845 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	C3orf85	A0A1B0GTC6	90 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	B3GALNT1	O75752	331 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	CRYZL1	O95825	349 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	OR5AC1	P0C628	307 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	F2R	P25116	425 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	BCAP31	P51572	246 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	CRIP2	P52943	208 aa	Predicted RBP	13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	PJVK	Q0ZLH3	352 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	RTL8B	Q17RB0	113 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	OR2B11	Q5JQS5	317 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	CASTOR1	Q8WTX7	329 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	MITD1	Q8WV92	249 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.41	□□□□□ -0.26
SNX17-209	ENST00000494893	WSB1	Q9Y6I7	421 aa		13.41	□□□□□ -0.26
SNX17-209	ENST00000494893		A0A0B4J2A0	478 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893		H0Y980	276 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	FCGR3B	O75015	233 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	CA2	P00918	260 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	IGHG4	P01861	327 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	RRAS	P10301	218 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	ANXA3	P12429	323 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	LGALS7	P47929	136 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	CATR1	Q13166	79 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	TMEM187	Q14656	261 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	PLGLA	Q15195	96 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	SP6	Q3SY56	376 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	RNF152	Q8N8N0	203 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	OR51H1	Q8NH63	302 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	GLYATL2	Q8WU03	294 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	TP53RK	Q96S44	253 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	SHPK	Q9UHJ6	478 aa		13.4	□□□□□ -0.26
SNX17-209	ENST00000494893	SHOX	O15266	292 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	SSNA1	O43805	119 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	SOX15	O60248	233 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	OPN1MW	P04001	364 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	RPLP1	P05386	114 aa	Known RBP	13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	OPN1MW2	P0DN77	364 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	OPN1MW3	P0DN78	364 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	RRAS2	P62070	204 aa	Predicted RBP	13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	RPL23A	P62750	156 aa	Known RBP	13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	SLC35B1	P78383	322 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	ANKRD55	Q3KP44	614 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	ZNF562	Q6V9R5	426 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	COMMD1	Q8N668	190 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	TCTEX1D1	Q8N7M0	179 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	COQ8A	Q8NI60	647 aa		13.39	□□□□□ -0.27
SNX17-209	ENST00000494893	CHAC2	Q8WUX2	184 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms