RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 CCL28Q9NRJ3 127 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 SSR3Q9UNL2 185 aa8.82□□□□□ -1
VTI1A-208ENST00000494728 TRAV18A0A075B6X5 111 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.81□□□□□ -1
VTI1A-208ENST00000494728 MEIS3P1A6NDR6 274 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 FAM223BA6NKX1 122 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 IGHV3-23P01764 117 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 CTXN2P0C2S0 81 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 NEDD8Q15843 81 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 HAGHQ16775 308 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 C15orf32Q32M92 178 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 FAM223AQ8IWN6 122 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 MFSD4AQ8N468 514 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 BEST4Q8NFU0 473 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 OR13F1Q8NGS4 319 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 OR4S2Q8NH73 311 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 TMEM167AQ8TBQ9 72 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 CACNG8Q8WXS5 425 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 FANCD2OSQ96PS1 177 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 CITED4Q96RK1 184 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 SPIN2AQ99865 258 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 SPIN2BQ9BPZ2 258 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 ZMAT4Q9H898 229 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 RETNQ9HD89 108 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 SIGLEC8Q9NYZ4 499 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 MRPS7Q9Y2R9 242 aaKnown RBP8.81□□□□□ -1
VTI1A-208ENST00000494728 PRELID3BQ9Y3B1 194 aa8.81□□□□□ -1
VTI1A-208ENST00000494728 TRAV3A0A0B4J244 114 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 NPIPB5A8MRT5 1133 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 SCGNO76038 276 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 REG1AP05451 166 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 ZNF735P0CB33 412 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 FCGR2CP31995 323 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 RPL27AP46776 148 aaKnown RBP8.8□□□□□ -1
VTI1A-208ENST00000494728 ATP5G2Q06055 141 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 TIMM50Q3ZCQ8 353 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 CD300EQ496F6 205 aaPredicted RBP8.8□□□□□ -1
VTI1A-208ENST00000494728 IDNKQ5T6J7 187 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 ZFAND6Q6FIF0 208 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 SGPP2Q8IWX5 399 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 NECAP1Q8NC96 275 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 SECTM1Q8WVN6 248 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 FYTTD1Q96QD9 318 aaKnown RBP8.8□□□□□ -1
VTI1A-208ENST00000494728 OR2A7Q96R45 310 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 HSD17B10Q99714 261 aaKnown RBP8.8□□□□□ -1
VTI1A-208ENST00000494728 AUNIPQ9H7T9 357 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 PLEKHA3Q9HB20 300 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 ZNF257Q9Y2Q1 563 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 ETV7Q9Y603 341 aa8.8□□□□□ -1
VTI1A-208ENST00000494728 FRAS1Q86XX4 4008 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 MFSD2BA6NFX1 497 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 CREBL2O60519 120 aaPredicted RBP8.79□□□□□ -1
VTI1A-208ENST00000494728 ACTL6BO94805 426 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 NDUFB8O95169 186 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 PPYP01298 95 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 CD7P09564 240 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 ARPC4P59998 168 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 OR4A47Q6IF82 309 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 LCN12Q6JVE5 192 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 ZNF818PQ6ZRF7 136 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 HOGA1Q86XE5 327 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 Q8N402 240 aa8.79□□□□□ -1
VTI1A-208ENST00000494728 YTHDF1Q9BYJ9 559 aaKnown RBP8.79□□□□□ -1
VTI1A-208ENST00000494728 C2orf70A6NJV1 201 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 ZNF785A8K8V0 405 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 H0Y980 276 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 SULT1C2O00338 296 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 SLC22A5O76082 557 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 OR2C1O95371 312 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 CRYGCP07315 174 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 CTRB1P17538 263 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 SCAND1P57086 179 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 FXYD4P59646 89 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 CD81P60033 236 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 CTRB2Q6GPI1 263 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 LINC00322Q6ZN03 302 aaPredicted RBP8.78□□□□□ -1
VTI1A-208ENST00000494728 ZNF66Q6ZN08 573 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 TMEM17Q86X19 198 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 FAM110AQ9BQ89 295 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 Q9H521 79 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 SLC2A9Q9NRM0 540 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 FBXL7Q9UJT9 491 aa8.78□□□□□ -1
VTI1A-208ENST00000494728 IGLV11-55A0A075B6I3 123 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 IGLC7A0M8Q6 106 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 TMEM213A2RRL7 107 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 S1PR2O95136 353 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 LYL1P12980 280 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 RPA2P15927 270 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 HLA-GP17693 338 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 PSMB6P28072 239 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 OR2B8PP59922 312 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 RPL8P62917 257 aaKnown RBP8.77□□□□□ -1.01
VTI1A-208ENST00000494728 KLK9Q2XQG4 91 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 KCTD21Q4G0X4 260 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 CLEC19AQ6UXS0 136 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 GTSCR1Q86UQ5 136 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 SPAG16Q8N0X2 631 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 DEFB125Q8N687 156 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 VSTM2AQ8TAG5 236 aa8.77□□□□□ -1.01
VTI1A-208ENST00000494728 WDR89Q96FK6 387 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms