RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 GPHA2Q96T91 129 aa13.86□□□□□ -0.19
BRAT1-206ENST00000493232 GGACTQ9BVM4 153 aa13.86□□□□□ -0.19
BRAT1-206ENST00000493232 RTN4RQ9BZR6 473 aa13.86□□□□□ -0.19
BRAT1-206ENST00000493232 RAXQ9Y2V3 346 aa13.86□□□□□ -0.19
BRAT1-206ENST00000493232 ATAD5Q96QE3 1844 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 RND3P61587 244 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 DLX6P56179 175 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 ABLIM2Q6H8Q1 611 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 PUSL1Q8N0Z8 303 aaKnown RBP13.85□□□□□ -0.19
BRAT1-206ENST00000493232 ZNRF1Q8ND25 227 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 APC2O95996 2303 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 SEC16AO15027 2179 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 LGALS3P17931 250 aaKnown RBP13.85□□□□□ -0.19
BRAT1-206ENST00000493232 GCHFRP30047 84 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 SSBP3Q9BWW4 388 aaPredicted RBP13.85□□□□□ -0.19
BRAT1-206ENST00000493232 RBFOX2O43251 390 aaKnown RBP eCLIP13.85□□□□□ -0.193e-6■■■■□ 21.5
BRAT1-206ENST00000493232 MEF2CQ06413 473 aaPredicted RBP13.85□□□□□ -0.19
BRAT1-206ENST00000493232 SMUG1Q53HV7 270 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 FAM159AQ6UWV7 190 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 C12orf54Q6X4T0 127 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 CYP2G1PQ6ZSU1 146 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 VKORC1L1Q8N0U8 176 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 KIR2DL4Q99706 377 aa13.85□□□□□ -0.19
BRAT1-206ENST00000493232 NPIPB9F8W1W9 429 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 TRGV3P03979 118 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 OR10AG1Q8NH19 301 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 C2orf68Q2NKX9 166 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 CLDND2Q8NHS1 167 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 HIST1H2BAQ96A08 127 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 CABIN1Q9Y6J0 2220 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 A0A0G2JLM5 398 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 H0YL77 283 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 H2BFSP57053 126 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 NUTF2P61970 127 aaKnown RBP13.84□□□□□ -0.19
BRAT1-206ENST00000493232 FAM27E3Q08E93 113 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 LRRC37AA6NMS7 1700 aa13.84□□□□□ -0.19
BRAT1-206ENST00000493232 C12orf77C9JDV5 145 aa13.83□□□□□ -0.19
BRAT1-206ENST00000493232 GOLT1AQ6ZVE7 132 aa13.83□□□□□ -0.19
BRAT1-206ENST00000493232 MRPS16Q9Y3D3 137 aaKnown RBP13.83□□□□□ -0.19
BRAT1-206ENST00000493232 CELA3AP09093 270 aa13.83□□□□□ -0.2
BRAT1-206ENST00000493232 ZFC3H1O60293 1989 aaKnown RBP13.83□□□□□ -0.2
BRAT1-206ENST00000493232 ZNF56Q15929 161 aa13.83□□□□□ -0.2
BRAT1-206ENST00000493232 C1QTNF5Q9BXJ0 243 aa13.83□□□□□ -0.2
BRAT1-206ENST00000493232 FOLR2P14207 255 aa13.83□□□□□ -0.2
BRAT1-206ENST00000493232 HIST1H1AQ02539 215 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-206ENST00000493232 RSPO4Q2I0M5 234 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-206ENST00000493232 SPATA45Q537H7 98 aa13.83□□□□□ -0.2
BRAT1-206ENST00000493232 IFI27L2Q9H2X8 130 aa13.83□□□□□ -0.2
BRAT1-206ENST00000493232 IGHV2OR16-5A0A0B4J2B6 119 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 TMEM250H0YL14 139 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 RPL39P5Q59GN2 51 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 RGPD3A6NKT7 1758 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-206ENST00000493232 COTL1Q14019 142 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 PARLQ9H300 379 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 ZIC3O60481 467 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 RAMP1O60894 148 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 LINC00305Q7Z4B0 112 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 IMMP1LQ96LU5 166 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 SH3BGRL3Q9H299 93 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 CD8AP01732 235 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 FABP2P12104 132 aa13.82□□□□□ -0.2
BRAT1-206ENST00000493232 A0A0B4J293 547 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 MOSP00540 346 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 IL6RP08887 468 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-206ENST00000493232 PEAR1Q5VY43 1037 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-206ENST00000493232 RARRES2Q99969 163 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 IGHV3OR16-10A0A075B7F0 116 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 KBTBD11-OT1A0A1B0GTJ5 212 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 H7C1H1 209 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 K7ERU9 68 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 HLA-DRB1P01911 266 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 SRIP30626 198 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 OR10S1Q8NGN2 331 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 VENTXO95231 258 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 BSPH1Q075Z2 132 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 NEU1Q99519 415 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 MBNL2Q5VZF2 373 aaKnown RBP13.81□□□□□ -0.2
BRAT1-206ENST00000493232 SFRP2Q96HF1 295 aa13.81□□□□□ -0.2
BRAT1-206ENST00000493232 GEMIN7Q9H840 131 aaKnown RBP13.81□□□□□ -0.2
BRAT1-206ENST00000493232 DNLZQ5SXM8 178 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 MRPL14Q6P1L8 145 aaKnown RBP13.8□□□□□ -0.2
BRAT1-206ENST00000493232 GPR61Q9BZJ8 451 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 UQCR10Q9UDW1 63 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 FOXI3A8MTJ6 420 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-206ENST00000493232 TCTAP57738 103 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 ABHD17AQ96GS6 310 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 H3BTX0 84 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 EFEMP2O95967 443 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 GPX4P36969 197 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-206ENST00000493232 FAM74A4Q5TZK3 123 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 FAM168AQ92567 244 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 HIST1H4GQ99525 98 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 TGIF2-C20orf24A0A0A6YYL0 155 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 NPFFO15130 113 aa13.8□□□□□ -0.2
BRAT1-206ENST00000493232 LOC107984156A0A0G2JMH3 177 aa13.79□□□□□ -0.2
BRAT1-206ENST00000493232 IQCF6A8MYZ5 107 aa13.79□□□□□ -0.2
BRAT1-206ENST00000493232 PPP1R17O96001 155 aa13.79□□□□□ -0.2
BRAT1-206ENST00000493232 SLC25A34Q6PIV7 304 aa13.79□□□□□ -0.2
BRAT1-206ENST00000493232 ARL17AQ8IVW1 177 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms