RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 HCP5Q6MZN7 132 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 TGIF2LXQ8IUE1 241 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 C1orf159Q96HA4 380 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 Q96MF0 132 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 TBX15Q96SF7 602 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 ZFP57Q9NU63 452 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 NSG2Q9Y328 171 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 CR1P17927 2039 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 ODF3BA8MYP8 253 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 RNASEK-C17orf49H0YIS7 233 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 MED6O75586 246 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 S1PR2O95136 353 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 HPRT1P00492 218 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 H2AFB1P0C5Y9 115 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 CAV2P51636 162 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 BTNL8Q6UX41 500 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 OR4S2Q8NH73 311 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 RNASE11Q8TAA1 199 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 SEC11CQ9BY50 192 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 MRPL20Q9BYC9 149 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 HRH4Q9H3N8 390 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 PARP11Q9NR21 331 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 UQCC1Q9NVA1 299 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 CELSR1Q9NYQ6 3014 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 MAST4O15021 2626 aa11.42□□□□□ -0.58
PDZRN3-210ENST00000492909 SCGB1D2O95969 90 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 MBPP02686 304 aaPredicted RBP11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 HTR1DP28221 377 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 DIAPH2-AS1Q14236 149 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 RTL8BQ17RB0 113 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 NMSQ5H8A3 153 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 LINC01356Q8N9X3 169 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 LSM10Q969L4 123 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 SPIN2AQ99865 258 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 SPIN2BQ9BPZ2 258 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 ARV1Q9H2C2 271 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 PLA2G2EQ9NZK7 142 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 TRAV20A0A0B4J274 112 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 TXNL1O43396 289 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 GPR137BO60478 399 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 APOA2P02652 100 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 GATA3P23771 443 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 CEACAM3P40198 252 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 DHRS7BQ6IAN0 325 aaPredicted RBP11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 UBAC2Q8NBM4 344 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 OR5AN1Q8NGI8 311 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 LHX4Q969G2 390 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 RPEQ96AT9 228 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 NABP2Q9BQ15 211 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 TMEM231Q9H6L2 316 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 SLC35D1Q9NTN3 355 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 DPM3Q9P2X0 92 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 POMT1Q9Y6A1 747 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 CREBBPQ92793 2442 aa11.41□□□□□ -0.58
PDZRN3-210ENST00000492909 LY6LH3BQJ8 138 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 SNAPINO95295 136 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 KRASP01116 189 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 IGKV1-5P01602 117 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 G6PCP35575 357 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 UBE2E1P51965 193 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 LGALS4P56470 323 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 GPR157Q5UAW9 335 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 MAPK1IP1LQ8NDC0 245 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 HIF1ANQ9NWT6 349 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 PRELID1Q9Y255 219 aa11.4□□□□□ -0.58
PDZRN3-210ENST00000492909 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 MARCH11A6NNE9 402 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 H0YJW9 148 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 H7C2Y5 167 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 EPHA1P21709 976 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 P2RY1P47900 373 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 F2RL1P55085 397 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 R3HDM4Q96D70 268 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 SMIM3Q9BZL3 60 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 MMP24Q9Y5R2 645 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 ZNF469Q96JG9 3925 aaPredicted RBP11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 ITPR3Q14573 2671 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 IGHV1-3A0A0C4DH29 117 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 A0A0G2JRQ6 117 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 A0A1B0GU03 582 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 FBXO24O75426 580 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 TSPAN9O75954 239 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 CD5P06127 495 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 SLC25A6P12236 298 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 NQO2P16083 231 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 MC5RP33032 325 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 RAB13P51153 203 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 ERVK-16P61578 105 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 FLI1Q01543 452 aaPredicted RBP11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 LDLRAD2Q5SZI1 272 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 TPTE2P1Q5T6R2 138 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 MINOS1Q5TGZ0 78 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 Q6ZRG5 221 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 LYPD6BQ8NI32 183 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 GPR146Q96CH1 333 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 C7orf69Q9H7B7 122 aa11.39□□□□□ -0.59
PDZRN3-210ENST00000492909 FAM96BQ9Y3D0 163 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms