RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 RAB25P57735 213 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 NDPQ00604 133 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 REEP5Q00765 189 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 PLGLB1Q02325 96 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 IHHQ14623 411 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 SSX1Q16384 188 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 ACSM3Q53FZ2 586 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 UBE2NLQ5JXB2 153 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 GLYATQ6IB77 296 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 ZIC4Q8N9L1 334 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 OR4C13Q8NGP0 309 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 OR5M1Q8NGP8 315 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 HAVCR2Q8TDQ0 301 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 PHYHIPLQ96FC7 376 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 CCDC42Q96M95 316 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 STACQ99469 402 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 BCL2L14Q9BZR8 327 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 CHST5Q9GZS9 411 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 VSIRQ9H7M9 311 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 SND1-IT1Q9HBX3 110 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 MED29Q9NX70 200 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 ZNF222Q9UK12 451 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.43□□□□□ -1.86
SND1-216ENST00000492840 WSB1Q9Y6I7 421 aa3.43□□□□□ -1.86
SND1-216ENST00000492840 YLPM1P49750 1951 aaKnown RBP3.43□□□□□ -1.86
SND1-216ENST00000492840 TENM3Q9P273 2699 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 A0A1W2PQL4 384 aaPredicted RBP3.42□□□□□ -1.86
SND1-216ENST00000492840 CD300LBA8K4G0 201 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 CENPBD1B2RD01 187 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 PANO1I0J062 215 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 PLIN3O60664 434 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 SLC25A16P16260 332 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 ZNF19P17023 458 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 PSMA1P25786 263 aaKnown RBP3.42□□□□□ -1.86
SND1-216ENST00000492840 SDC4P31431 198 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 SRP14P37108 136 aaKnown RBP3.42□□□□□ -1.86
SND1-216ENST00000492840 TPI1P60174 286 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 RPL26P61254 145 aaKnown RBP3.42□□□□□ -1.86
SND1-216ENST00000492840 MPPED2Q15777 294 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 TEX30Q5JUR7 227 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 LINC00596Q86U02 117 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 RPS19BP1Q86WX3 136 aaKnown RBP3.42□□□□□ -1.86
SND1-216ENST00000492840 ZNF584Q8IVC4 421 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 TMEM256Q8N2U0 113 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 TTLQ8NG68 377 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 ASB13Q8WXK3 278 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 ZNF285Q96NJ3 590 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 SELENOSQ9BQE4 189 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 EBPLQ9BY08 206 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 ZNRD1Q9P1U0 126 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 RPL26L1Q9UNX3 145 aaKnown RBP3.42□□□□□ -1.86
SND1-216ENST00000492840 HERC2O95714 4834 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 KIAA1549Q9HCM3 1950 aa3.42□□□□□ -1.86
SND1-216ENST00000492840 A0A096LNJ9 63 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 IGHV2-26A0A0B4J1V2 119 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 TMEM223A0PJW6 202 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 TMEM114B3SHH9 223 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 TRIM49D1C9J1S8 452 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 CYB5R3P00387 301 aaPredicted RBP3.41□□□□□ -1.86
SND1-216ENST00000492840 SNRPAP09012 282 aaKnown RBP3.41□□□□□ -1.86
SND1-216ENST00000492840 OR56A5P0C7T3 313 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 MAXP61244 160 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 LSM6P62312 80 aaKnown RBP3.41□□□□□ -1.86
SND1-216ENST00000492840 RNF212Q495C1 297 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 ZCWPW2Q504Y3 356 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 YIF1BQ5BJH7 314 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 WDR86Q86TI4 376 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 PDPNQ86YL7 162 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 ZNF555Q8NEP9 628 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 CIRBP-AS1Q8TBR5 109 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 ZNF418Q8TF45 676 aaPredicted RBP3.41□□□□□ -1.86
SND1-216ENST00000492840 NARS2Q96I59 477 aaKnown RBP3.41□□□□□ -1.86
SND1-216ENST00000492840 ANAPC13Q9BS18 74 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 MED18Q9BUE0 208 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 TTTY12Q9BZ98 90 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 TSGA10Q9BZW7 698 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 ZNF436Q9C0F3 470 aaPredicted RBP3.41□□□□□ -1.86
SND1-216ENST00000492840 SLC22A13Q9Y226 551 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 ALG5Q9Y673 324 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 ZNF780BQ9Y6R6 833 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 CADP27708 2225 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 NOTCH3Q9UM47 2321 aa3.41□□□□□ -1.86
SND1-216ENST00000492840 DYNC2H1Q8NCM8 4307 aaKnown RBP3.4□□□□□ -1.86
SND1-216ENST00000492840 IGHV3-49A0A0A0MS15 119 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 TRGV5A0A0B4J1U4 118 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 IGKV1-6A0A0C4DH72 117 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 LGALS9O00182 355 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 ACOX3O15254 700 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 SULT1B1O43704 296 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 COX7A2P2O60397 106 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 IGKV1-39P01597 117 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 IGKV1D-39P04432 117 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 ELK4P28324 431 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 RPL12P30050 165 aaKnown RBP3.4□□□□□ -1.87
SND1-216ENST00000492840 AGTR1P30556 359 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 CBX5P45973 191 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 CMC4P56277 68 aaPredicted RBP3.4□□□□□ -1.87
SND1-216ENST00000492840 PPP1R1AQ13522 171 aa3.4□□□□□ -1.87
SND1-216ENST00000492840 ZNF239Q16600 458 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms