RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 DYNLT3P51808 116 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 PJVKQ0ZLH3 352 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 SSX2Q16385 188 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 OR8G2PQ6IF36 304 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 TCTEX1D1Q8N7M0 179 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 HSD17B11Q8NBQ5 300 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 ZNF596Q8TC21 504 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 LHX4Q969G2 390 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 RPEQ96AT9 228 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 HSPB7Q9UBY9 170 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 RBFOX2O43251 390 aaKnown RBP eCLIP11.25□□□□□ -0.61
SMPD4-219ENST00000491128 APOA2P02652 100 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 DYNAPQ8N1N2 210 aa11.25□□□□□ -0.61
SMPD4-219ENST00000491128 FLYWCH2Q96CP2 140 aaKnown RBP11.25□□□□□ -0.61
SMPD4-219ENST00000491128 IGHV1-3A0A0C4DH29 117 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 IGHV2-70DA0A0C4DH43 119 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 APELAP0DMC3 54 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 DTD1Q8TEA8 209 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 ADTRPQ96IZ2 230 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 CLCC1Q96S66 551 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 SH3BGRL3Q9H299 93 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 E7EUB6 86 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 I3L521 148 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 ATG12O94817 140 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 TOX4O94842 621 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 PRTN3P24158 256 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 KIR2DS2P43631 304 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 C10orf55Q5SWW7 151 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 CXorf58Q96LI9 332 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 ZFP57Q9NU63 452 aa11.24□□□□□ -0.61
SMPD4-219ENST00000491128 SLC25A17O43808 307 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 HOXB4P17483 251 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-219ENST00000491128 CLEC12BQ2HXU8 276 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 HAPLN4Q86UW8 402 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 BAP18Q8IXM2 172 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 OR4C12Q96R67 309 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 RPS10-NUDT3A0A1W2PQS6 291 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 TIMM23O14925 209 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 GOSR1O95249 250 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 RPL23AP62750 156 aaKnown RBP11.23□□□□□ -0.61
SMPD4-219ENST00000491128 UBA52P62987 128 aaKnown RBP11.23□□□□□ -0.61
SMPD4-219ENST00000491128 FAM216AQ8WUB2 273 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 TBX15Q96SF7 602 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 SIRPDQ9H106 197 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 FAM212BQ9NTI7 297 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-219ENST00000491128 COA4Q9NYJ1 87 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 PLA2G2EQ9NZK7 142 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 CSPG4Q6UVK1 2322 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 M0R1W7 72 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 HRASP01112 189 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 HTR1DP28221 377 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 RUNX1Q01196 453 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 C8orf31Q8N9H6 132 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 BEND2Q8NDZ0 799 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 OR10W1Q8NGF6 305 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 RAB40CQ96S21 281 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 MS4A7Q9GZW8 240 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-219ENST00000491128 WASHC3Q9Y3C0 194 aa11.23□□□□□ -0.61
SMPD4-219ENST00000491128 SOX21Q9Y651 276 aaPredicted RBP11.23□□□□□ -0.61
SMPD4-219ENST00000491128 NOTCH2Q04721 2471 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 VWC2LB2RUY7 222 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 SNAPC5O75971 98 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 TPT1P13693 172 aaKnown RBP11.22□□□□□ -0.61
SMPD4-219ENST00000491128 MMP9P14780 707 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 IL3RAP26951 378 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 ZNF137PP52743 207 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 GPR157Q5UAW9 335 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 GSX2Q9BZM3 304 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 WSB1Q9Y6I7 421 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.22□□□□□ -0.619e-7■■■□□ 16.6
SMPD4-219ENST00000491128 TET2Q6N021 2002 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-219ENST00000491128 LY6LH3BQJ8 138 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 RBP4P02753 201 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 GAPDHP04406 335 aaKnown RBP11.22□□□□□ -0.61
SMPD4-219ENST00000491128 DVL1P1P54792 670 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-219ENST00000491128 AANATQ16613 207 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 COMMD7Q86VX2 200 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 OR4C13Q8NGP0 309 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 SCARB1Q8WTV0 552 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 PSMG3-AS1Q96PY0 264 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 AIFM2Q9BRQ8 373 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 HEYLQ9NQ87 328 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-219ENST00000491128 TCF19Q9Y242 345 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 OR51B2Q9Y5P1 312 aa11.22□□□□□ -0.61
SMPD4-219ENST00000491128 PRRC2AP48634 2157 aaKnown RBP11.21□□□□□ -0.61
SMPD4-219ENST00000491128 UNC79Q9P2D8 2635 aa11.21□□□□□ -0.61
SMPD4-219ENST00000491128 A0A1W2PPI3 338 aa11.21□□□□□ -0.61
SMPD4-219ENST00000491128 C15orf61A6NNL5 157 aa11.21□□□□□ -0.61
SMPD4-219ENST00000491128 TSPAN9O75954 239 aa11.21□□□□□ -0.61
SMPD4-219ENST00000491128 IGLV2-23P01705 113 aa11.21□□□□□ -0.61
SMPD4-219ENST00000491128 HOXA1P49639 335 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-219ENST00000491128 TPTE2P1Q5T6R2 138 aa11.21□□□□□ -0.61
SMPD4-219ENST00000491128 RUSC1-AS1Q66K80 236 aa11.21□□□□□ -0.61
SMPD4-219ENST00000491128 OR11H6Q8NGC7 330 aa11.21□□□□□ -0.61
SMPD4-219ENST00000491128 SLC25A31Q9H0C2 315 aa11.21□□□□□ -0.61
SMPD4-219ENST00000491128 DPM3Q9P2X0 92 aa11.21□□□□□ -0.61
SMPD4-219ENST00000491128 TLN2Q9Y4G6 2542 aa11.21□□□□□ -0.62
SMPD4-219ENST00000491128 PIGBOS1A0A0B4J2F0 54 aa11.21□□□□□ -0.62
SMPD4-219ENST00000491128 NMBP08949 121 aa11.21□□□□□ -0.62
SMPD4-219ENST00000491128 BRD3OSQ6XYD6 125 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms