RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 TRAPPC2LH3BP13 241 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 K7EPK0 472 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 UBE2CO00762 179 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 CDIPTO14735 213 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 ADAM20O43506 726 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 SPRY1O43609 319 aaPredicted RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 NDUFB3O43676 98 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 ENSAO43768 121 aaKnown RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 CRTAPO75718 401 aaPredicted RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 NXPH2O95156 264 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 PTBP3O95758 552 aaKnown RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 IFNA21P01568 189 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 IGLV3-1P01715 115 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 IGHV2-70P01814 119 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 IGHV2-5P01817 119 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 MT-ND4LP03901 98 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 SFTPBP07988 381 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 HCKP08631 526 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 SEC11BP0C7V7 166 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 RCC1P18754 421 aaPredicted RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 GLRA1P23415 457 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 RPL12P30050 165 aaKnown RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 FCGR2CP31995 323 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 MAS1LP35410 378 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 CFHR2P36980 270 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 PTGFRP43088 359 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 HAAOP46952 286 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 KCNJ3P48549 501 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 RBP2P50120 134 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 RAB5CP51148 216 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 SNU13P55769 128 aaKnown RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 MTCP1P56278 107 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 S100A10P60903 97 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 LCN2P80188 198 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 ARFRP1Q13795 201 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 RBM39Q14498 530 aaKnown RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 FAM120AOSQ5T036 256 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 GPR157Q5UAW9 335 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 PRAMEF6Q5VXH4 476 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 Q6ZRG5 221 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 RNF144BQ7Z419 303 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 SGPP2Q8IWX5 399 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 MKXQ8IYA7 352 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 Q8IYB0 196 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 ZNF561Q8N587 486 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 FAM71E2Q8N5Q1 922 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 UBAC2Q8NBM4 344 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 TMEM104Q8NE00 496 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 OR51T1Q8NGJ9 327 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 ZNF418Q8TF45 676 aaPredicted RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 HIST1H2BAQ96A08 127 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 MALSU1Q96EH3 234 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 SPACA5Q96QH8 159 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 GPER1Q99527 375 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 CMSS1Q9BQ75 279 aaKnown RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 SULT4A1Q9BR01 284 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 TCEAL7Q9BRU2 100 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 ST6GALNAC5Q9BVH7 336 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 PECRQ9BY49 303 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 BANF2Q9H503 90 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 OR2S2Q9NQN1 319 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 FAM212BQ9NTI7 297 aaPredicted RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 EHFQ9NZC4 300 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 METTL1Q9UBP6 276 aaKnown RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 FBXL17Q9UF56 701 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 CACFD1Q9UGQ2 172 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 NSG2Q9Y328 171 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 FAM96BQ9Y3D0 163 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 STRAPQ9Y3F4 350 aaKnown RBP3.85□□□□□ -1.79
CSTF1-205ENST00000490539 V9GYS6 101 aa3.85□□□□□ -1.79
CSTF1-205ENST00000490539 TENM1Q9UKZ4 2725 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 VWFP04275 2813 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 ZANQ9Y493 2812 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 A0A096LNT2 108 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 BORCS7-ASMTA0A0B4J1R7 106 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 IGKV1-9A0A0C4DH69 117 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 A0A1W2PP11 408 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 C5orf52A6NGY3 159 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 SH2D7A6NKC9 451 aaPredicted RBP3.84□□□□□ -1.79
CSTF1-205ENST00000490539 C9JQL5 133 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 J3QT63 122 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 SDCBPO00560 298 aaPredicted RBP3.84□□□□□ -1.79
CSTF1-205ENST00000490539 GPR137BO60478 399 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 EIF3GO75821 320 aaKnown RBP eCLIP3.84□□□□□ -1.79
CSTF1-205ENST00000490539 S100A9P06702 114 aaKnown RBP3.84□□□□□ -1.79
CSTF1-205ENST00000490539 HOXB5P09067 269 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 ACAA1P09110 424 aaPredicted RBP3.84□□□□□ -1.79
CSTF1-205ENST00000490539 WNT2P09544 360 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 DTYMKP23919 212 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 ACKR3P25106 362 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 NFYBP25208 207 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 BLVRBP30043 206 aaPredicted RBP3.84□□□□□ -1.79
CSTF1-205ENST00000490539 HOXD3P31249 432 aaPredicted RBP3.84□□□□□ -1.79
CSTF1-205ENST00000490539 CD80P33681 288 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 SNCAP37840 140 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 GLP1RP43220 463 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 GABRA2P47869 451 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 BPIFB3P59826 476 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 LMO4P61968 165 aa3.84□□□□□ -1.79
CSTF1-205ENST00000490539 SNRPEP62304 92 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms