RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 TRAV3A0A0B4J244 114 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 IGLV1-40P01703 118 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 RPA2P15927 270 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 NQO2P16083 231 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 PSMB8P28062 276 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 LPAR6P43657 344 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 AP3S2P59780 193 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 SLC35B1P78383 322 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 SURF2Q15527 256 aaPredicted RBP11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 PRR31Q5SQ13 230 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 TEX38Q6PEX7 206 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 LINC00299Q6ZSB3 139 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 C18orf65Q6ZTR6 163 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 NDUFA11Q86Y39 141 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 ZFAND1Q8TCF1 268 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 GON7Q9BXV9 100 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 KLK15Q9H2R5 256 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 COMMD9Q9P000 198 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 VSIG4Q9Y279 399 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 A0A1B0GW64 132 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 A0A1W2PRX2 142 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 MARCH11A6NNE9 402 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 E7EUB6 86 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 CNIH1O95406 144 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 IL7P13232 177 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 MYOD1P15172 320 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 ECI1P42126 302 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 FOXE3Q13461 319 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 TNXAQ16473 311 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 AKIRIN2Q53H80 203 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 TCTEX1D1Q8N7M0 179 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 ABHD5Q8WTS1 349 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 CASTOR1Q8WTX7 329 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 R3HDM4Q96D70 268 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 FAM212BQ9NTI7 297 aaPredicted RBP11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 TMEM140Q9NV12 185 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 BET1LQ9NYM9 111 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 SCP2D1Q9UJQ7 156 aa11.24□□□□□ -0.61
SRGAP3-208ENST00000490348 NOTCH3Q9UM47 2321 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 H0Y980 276 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 KRASP01116 189 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 APELAP0DMC3 54 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 S100GP29377 79 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 FAUP35544 74 aaKnown RBP11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 G6PCP35575 357 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 KIAA0141Q14154 515 aaPredicted RBP11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 C2orf68Q2NKX9 166 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 SP6Q3SY56 376 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 TRIQKQ629K1 86 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 ZNF57Q68EA5 555 aaPredicted RBP11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 MMD2Q8IY49 270 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 COMMD1Q8N668 190 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 ADAD2Q8NCV1 583 aaKnown RBP11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 VSTM2AQ8TAG5 236 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 SRSF12Q8WXF0 261 aaKnown RBP11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 DEDD2Q8WXF8 326 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 TMEM230Q96A57 120 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 COPZ2Q9P299 210 aa11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
SRGAP3-208ENST00000490348 MEGF8Q7Z7M0 2845 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 C3orf85A0A1B0GTC6 90 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 A0A1W2PN81 502 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 MSGN1A6NI15 193 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 CGB1A6NKQ9 187 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 M0QZ24 198 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 ELANEP08246 267 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 CHRNA7P36544 502 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 UNQ5815/PRO19632Q6UWF5 114 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 MYOZ3Q8TDC0 251 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 SEC22AQ96IW7 307 aa11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 FOXA2Q9Y261 457 aaPredicted RBP11.22□□□□□ -0.61
SRGAP3-208ENST00000490348 LINC00854A0A1B0GVQ3 168 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 CRYM-AS1A6NIL9 109 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 TEX22C9J3V5 150 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 UPK2O00526 184 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 OPN1MWP04001 364 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 OPN1MW2P0DN77 364 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 OPN1MW3P0DN78 364 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 HLA-GP17693 338 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 BTCP35070 178 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 RPL23AP62750 156 aaKnown RBP11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 RPL8P62917 257 aaKnown RBP11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 KHDC1LQ5JSQ8 128 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 CCDC71LQ8N9Z2 235 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 DMBX1Q8NFW5 382 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 OR4A5Q8NH83 315 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 AIFM2Q9BRQ8 373 aa11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 C14orf166Q9Y224 244 aaKnown RBP11.21□□□□□ -0.61
SRGAP3-208ENST00000490348 CREBL2O60519 120 aaPredicted RBP11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 IGKV1-5P01602 117 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 OR5AC1P0C628 307 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 OR9G9P0C7N8 305 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 UCP1P25874 307 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 CCR6P51684 374 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 TMEM267Q0VDI3 215 aaPredicted RBP11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 OR5T1Q8NG75 326 aa11.2□□□□□ -0.62
SRGAP3-208ENST00000490348 NAA60Q9H7X0 242 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms