RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 CTDSP1Q9GZU7 261 aa4.2□□□□□ -1.74
PTPRK-213ENST00000490332 PARP12Q9H0J9 701 aaKnown RBP4.2□□□□□ -1.74
PTPRK-213ENST00000490332 SH3BGRL3Q9H299 93 aa4.2□□□□□ -1.74
PTPRK-213ENST00000490332 SAV1Q9H4B6 383 aaPredicted RBP4.2□□□□□ -1.74
PTPRK-213ENST00000490332 GCM1Q9NP62 436 aa4.2□□□□□ -1.74
PTPRK-213ENST00000490332 SLC39A9Q9NUM3 307 aa4.2□□□□□ -1.74
PTPRK-213ENST00000490332 TMEM242Q9NWH2 141 aa4.2□□□□□ -1.74
PTPRK-213ENST00000490332 OR6C3Q9NZP0 311 aa4.2□□□□□ -1.74
PTPRK-213ENST00000490332 OR1A1Q9P1Q5 309 aa4.2□□□□□ -1.74
PTPRK-213ENST00000490332 JPT1Q9UK76 154 aa4.2□□□□□ -1.74
PTPRK-213ENST00000490332 CMYA5Q8N3K9 4069 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 IGHV2OR16-5A0A0B4J2B6 119 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 LOC102723971A0A1B0GUV8 181 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 TMEM238LA0A1B0GVL6 79 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 SRRM5B3KS81 715 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 C12orf77C9JDV5 145 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 H0YL77 283 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 H3BQ15 152 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 SIGLEC5O15389 551 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 CYB5BO43169 146 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 MLNRO43193 412 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 CD5LO43866 347 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 MPDU1O75352 247 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 OR2C1O95371 312 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 HPRT1P00492 218 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 CGAP01215 116 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 IGKV1-39P01597 117 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 IGKV1D-39P04432 117 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 CECR9P0C854 216 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 P0C879 139 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 OR13C7P0DN81 318 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 RAB5AP20339 215 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 TNFSF4P23510 183 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 PPP1CCP36873 323 aaKnown RBP4.19□□□□□ -1.74
PTPRK-213ENST00000490332 GPR12P47775 334 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 GABRA2P47869 451 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 FHITP49789 147 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 COL10A1Q03692 680 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 TNFRSF9Q07011 255 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 AESQ08117 197 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 SLC38A11Q08AI6 406 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 EIF4EBP1Q13541 118 aaPredicted RBP4.19□□□□□ -1.74
PTPRK-213ENST00000490332 TMEM249Q2WGJ8 235 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 ALKBH6Q3KRA9 238 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 SPANXN5Q5MJ07 72 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 Q6ZRM9 215 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 ODF3L1Q8IXM7 274 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 GCNT2Q8N0V5 402 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 PRR18Q8N4B5 295 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.19□□□□□ -1.74
PTPRK-213ENST00000490332 OR13D1Q8NGV5 346 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 OR1L1Q8NH94 360 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 CLDND2Q8NHS1 167 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 FAM222BQ8WU58 562 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 LRRC29Q8WV35 223 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 TCTEX1D2Q8WW35 142 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 TAF15Q92804 592 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTPRK-213ENST00000490332 HIST1H2BAQ96A08 127 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 ADTRPQ96IZ2 230 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 BTF3L4Q96K17 158 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 OR4C12Q96R67 309 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 TXNDC17Q9BRA2 123 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 SFXN3Q9BWM7 321 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 ACTR3CQ9C0K3 210 aaPredicted RBP4.19□□□□□ -1.74
PTPRK-213ENST00000490332 WDR61Q9GZS3 305 aaKnown RBP4.19□□□□□ -1.74
PTPRK-213ENST00000490332 OR2D2Q9H210 308 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 RBKSQ9H477 322 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 YAE1D1Q9NRH1 226 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 KCNIP2Q9NS61 270 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 VAX2Q9UIW0 290 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 PUS1Q9Y606 427 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTPRK-213ENST00000490332 SLC25A15Q9Y619 301 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 ROS1P08922 2347 aa4.19□□□□□ -1.74
PTPRK-213ENST00000490332 HEATR1Q9H583 2144 aaKnown RBP4.19□□□□□ -1.74
PTPRK-213ENST00000490332 KIAA2026Q5HYC2 2103 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 IGHV1-18A0A0C4DH31 117 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 A0A0G2JRQ6 117 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 CTXND1A0A1B0GTU2 59 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 ODAMA1E959 279 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 SMCO3A2RU48 225 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 C5orf52A6NGY3 159 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 CEBPZOSA8MTT3 80 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 TMEM250H0YL14 139 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 F2RL2O00254 374 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 TNFSF13O75888 250 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 VENTXO95231 258 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 KRASP01116 189 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 METTL15P1P0C7V9 234 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 BCL2P10415 239 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 IAPPP10997 89 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 GLIPR1P48060 266 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 PSMB3P49720 205 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 ASCL1P50553 236 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 AKR1D1P51857 326 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 KLF3P57682 345 aaPredicted RBP4.18□□□□□ -1.74
PTPRK-213ENST00000490332 SPCS3P61009 180 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 ERVS71-1P61550 626 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 ERVK-16P61578 105 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 RAB11AP62491 216 aa4.18□□□□□ -1.74
PTPRK-213ENST00000490332 CCL20P78556 96 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms