RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 CRYGBP07316 175 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 RNASE1P07998 156 aaKnown RBP11.06□□□□□ -0.64
C9orf3-221ENST00000489562 CNTFRP26992 372 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 SSX9Q7RTT3 188 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 PPP1R27Q86WC6 154 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 MMD2Q8IY49 270 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 VKORC1L1Q8N0U8 176 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 C5orf56Q8N8D9 126 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 TMEM167AQ8TBQ9 72 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 NPFFR1Q9GZQ6 430 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 OR51J1Q9H342 316 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 FBXL15Q9H469 300 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 ESM1Q9NQ30 184 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 TNFRSF19Q9NS68 423 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 PRR13Q9NZ81 148 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 SIGLEC9Q9Y336 463 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 ALG5Q9Y673 324 aa11.06□□□□□ -0.64
C9orf3-221ENST00000489562 A0A0B4J293 547 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 DBX1A6NMT0 343 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 TRIM77I1YAP6 450 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 CHST1O43916 411 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 SNAPC5O75971 98 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 HLA-DRB1P01911 266 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 IL6RP08887 468 aaPredicted RBP11.05□□□□□ -0.64
C9orf3-221ENST00000489562 P0C879 139 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 MAS1LP35410 378 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 UBA52P62987 128 aaKnown RBP11.05□□□□□ -0.64
C9orf3-221ENST00000489562 LIN54Q6MZP7 749 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 TET2Q6N021 2002 aaPredicted RBP11.05□□□□□ -0.64
C9orf3-221ENST00000489562 LYZL2Q7Z4W2 148 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 RBMXL1Q96E39 390 aaKnown RBP11.05□□□□□ -0.64
C9orf3-221ENST00000489562 SPIN2AQ99865 258 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 SPIN2BQ9BPZ2 258 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 RANBP3Q9H6Z4 567 aaPredicted RBP11.05□□□□□ -0.64
C9orf3-221ENST00000489562 CACFD1Q9UGQ2 172 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 SVEP1Q4LDE5 3571 aa11.05□□□□□ -0.64
C9orf3-221ENST00000489562 UPK2O00526 184 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 SSNA1O43805 119 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 ACTL6BO94805 426 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 SLC25A6P12236 298 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 RPL8P62917 257 aaKnown RBP11.04□□□□□ -0.64
C9orf3-221ENST00000489562 PRSS8Q16651 343 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 NMSQ5H8A3 153 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 THOC7Q6I9Y2 204 aaKnown RBP11.04□□□□□ -0.64
C9orf3-221ENST00000489562 FOXRED2Q8IWF2 684 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 DUX5Q96PT3 197 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 COA4Q9NYJ1 87 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 FKBP11Q9NYL4 201 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 PRNDQ9UKY0 176 aa11.04□□□□□ -0.64
C9orf3-221ENST00000489562 ANK3Q12955 4377 aaKnown RBP11.04□□□□□ -0.64
C9orf3-221ENST00000489562 A0A1B0GU03 582 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 CRYBA1P05813 215 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 HOXB5P09067 269 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 SULT1A3P0DMM9 295 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 SULT1A4P0DMN0 295 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 HLA-GP17693 338 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 GGNBP1Q5YKI7 109 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 Q6ZNX1 250 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 UXS1Q8NBZ7 420 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 OR4A16Q8NH70 328 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 PRSS22Q9GZN4 317 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 ZNF430Q9H8G1 570 aaPredicted RBP11.03□□□□□ -0.64
C9orf3-221ENST00000489562 TPSG1Q9NRR2 321 aa11.03□□□□□ -0.64
C9orf3-221ENST00000489562 FAM181BA6NEQ2 426 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 C15orf61A6NNL5 157 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 KCNAB3O43448 404 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 RBMXL2O75526 392 aaKnown RBP11.02□□□□□ -0.65
C9orf3-221ENST00000489562 CA2P00918 260 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 AMY1AP04745 511 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 OR9G9P0C7N8 305 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 RELBQ01201 579 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 SMCO1Q147U7 214 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 ZNF562Q6V9R5 426 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 ZNF429Q86V71 674 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 OR5B3Q8NH48 314 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 GPR146Q96CH1 333 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 COMMD5Q9GZQ3 224 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 MED28Q9H204 178 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-221ENST00000489562 TMEM14BQ9NUH8 114 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 CACNG5Q9UF02 275 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 FOXA2Q9Y261 457 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-221ENST00000489562 ZNF257Q9Y2Q1 563 aa11.02□□□□□ -0.65
C9orf3-221ENST00000489562 A0A0G2JRQ6 117 aa11.01□□□□□ -0.65
C9orf3-221ENST00000489562 ADAP1O75689 374 aa11.01□□□□□ -0.65
C9orf3-221ENST00000489562 TNXAQ16473 311 aa11.01□□□□□ -0.65
C9orf3-221ENST00000489562 MRGPRG-AS1Q2M3A8 158 aa11.01□□□□□ -0.65
C9orf3-221ENST00000489562 AARDQ4LEZ3 155 aa11.01□□□□□ -0.65
C9orf3-221ENST00000489562 GSG1LQ6UXU4 331 aa11.01□□□□□ -0.65
C9orf3-221ENST00000489562 CLCC1Q96S66 551 aa11.01□□□□□ -0.65
C9orf3-221ENST00000489562 PDCD10Q9BUL8 212 aa11.01□□□□□ -0.65
C9orf3-221ENST00000489562 IGHV7-81A0A0B4J1V7 117 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 TRAV3A0A0B4J244 114 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 CNIH1O95406 144 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 IGHG2P01859 326 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 COMPP49747 757 aaPredicted RBP11□□□□□ -0.65
C9orf3-221ENST00000489562 RRAS2P62070 204 aaPredicted RBP11□□□□□ -0.65
C9orf3-221ENST00000489562 CX3CL1P78423 397 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 PJVKQ0ZLH3 352 aa11□□□□□ -0.65
C9orf3-221ENST00000489562 FXYD3Q14802 87 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms