RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 TENM1Q9UKZ4 2725 aa6.52□□□□□ -1.37
SF1-218ENST00000489544 A0A1B0GUS0 222 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 NAP1L6A6NFF2 107 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 CRYM-AS1A6NIL9 109 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 CENPXA8MT69 81 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 E7EUB6 86 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 AP4M1O00189 453 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 OR2A4O95047 310 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 NDUFB6O95139 128 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 HRASP01112 189 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 SERPINE2P07093 398 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 OR9G9P0C7N8 305 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 CD28P10747 220 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 NQO2P16083 231 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 TAS2R31P59538 309 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 RBMS2Q15434 407 aaKnown RBP6.51□□□□□ -1.37
SF1-218ENST00000489544 TNXAQ16473 311 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 ECSCRQ19T08 205 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 TRIM16LQ309B1 348 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 TCTEX1D4Q5JR98 221 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 ZNF562Q6V9R5 426 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 CENPVQ7Z7K6 275 aaPredicted RBP6.51□□□□□ -1.37
SF1-218ENST00000489544 FOXRED2Q8IWF2 684 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 STPG2Q8N412 459 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 TEX45Q8NA69 505 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 DMBX1Q8NFW5 382 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 OR5AU1Q8NGC0 362 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 CD300LFQ8TDQ1 290 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 WIPF2Q8TF74 440 aaPredicted RBP6.51□□□□□ -1.37
SF1-218ENST00000489544 GLYATL2Q8WU03 294 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 DEDD2Q8WXF8 326 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 ARPC1AQ92747 370 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 OR2A7Q96R45 310 aa6.51□□□□□ -1.37
SF1-218ENST00000489544 C7orf50Q9BRJ6 194 aaKnown RBP6.51□□□□□ -1.37
SF1-218ENST00000489544 FBN3Q75N90 2809 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 STAB1Q9NY15 2570 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 TRAV6A0A075B6T7 132 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 A0A0G2JRQ6 117 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 A0A1B0GW64 132 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 PSMB11A5LHX3 300 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 HMX3A6NHT5 357 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 MSGN1A6NI15 193 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 DBX1A6NMT0 343 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 MARCH11A6NNE9 402 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 UPK2O00526 184 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 KCNAB3O43448 404 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 SOX15O60248 233 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 KBTBD11O94819 623 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 CNIH1O95406 144 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 IGKV1-5P01602 117 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 IL6RP08887 468 aaPredicted RBP6.5□□□□□ -1.37
SF1-218ENST00000489544 ANXA7P20073 488 aaKnown RBP6.5□□□□□ -1.37
SF1-218ENST00000489544 UCP1P25874 307 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 OR2B8PP59922 312 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 PPP1R1AQ13522 171 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 TMEM187Q14656 261 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 POU2AF1Q16633 256 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 ASPHD1Q5U4P2 390 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 C19orf35Q6ZS72 473 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 SGPP2Q8IWX5 399 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 CENPSQ8N2Z9 138 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 LFNGQ8NES3 379 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 TMEM167AQ8TBQ9 72 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 SRSF12Q8WXF0 261 aaKnown RBP6.5□□□□□ -1.37
SF1-218ENST00000489544 SEC22AQ96IW7 307 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 SCGB3A2Q96PL1 93 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 CITED2Q99967 270 aaPredicted RBP6.5□□□□□ -1.37
SF1-218ENST00000489544 SLC25A21Q9BQT8 299 aaPredicted RBP6.5□□□□□ -1.37
SF1-218ENST00000489544 ZNF747Q9BV97 191 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 COMMD9Q9P000 198 aa6.5□□□□□ -1.37
SF1-218ENST00000489544 TRAV41A0A0B4J266 112 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 A0A1W2PN81 502 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 A0A1W2PRX2 142 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 CGB1A6NKQ9 187 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 TCRBP04435 133 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 IGF1P05019 195 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 HLA-GP17693 338 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 VDAC1P21796 283 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 VAMP1P23763 118 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 SLC6A1P30531 599 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 CHRNA7P36544 502 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 AKR1C2P52895 323 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 RAB25P57735 213 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 ERVK-16P61578 105 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 RPL8P62917 257 aaKnown RBP6.49□□□□□ -1.37
SF1-218ENST00000489544 DEFA5Q01523 94 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 CFHR3Q02985 330 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 ASAH1Q13510 395 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 ANKRD55Q3KP44 614 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 C19orf54Q5BKX5 351 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 TMEM268Q5VZI3 342 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 UNQ5815/PRO19632Q6UWF5 114 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 C18orf65Q6ZTR6 163 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 SLC25A42Q86VD7 318 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 MMD2Q8IY49 270 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 SELENOHQ8IZQ5 122 aaKnown RBP6.49□□□□□ -1.37
SF1-218ENST00000489544 TCTEX1D1Q8N7M0 179 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 OR5T1Q8NG75 326 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 SGMS2Q8NHU3 365 aa6.49□□□□□ -1.37
SF1-218ENST00000489544 VSTM2AQ8TAG5 236 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms